Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cspg4Q8VHY0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cspg4Q8VHY0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cspg4Q8VHY0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.52□□□□□ -0.09
Cspg4Q8VHY0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cspg4Q8VHY0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cspg4Q8VHY0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cspg4Q8VHY0 Gm11025-201ENSMUST00000140773 466 ntBASIC14.52□□□□□ -0.09
Cspg4Q8VHY0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cspg4Q8VHY0 Gm43767-201ENSMUST00000198933 381 ntBASIC14.52□□□□□ -0.09
Cspg4Q8VHY0 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.52□□□□□ -0.09
Cspg4Q8VHY0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cspg4Q8VHY0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cspg4Q8VHY0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cspg4Q8VHY0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Gm27000-201ENSMUST00000182943 842 ntBASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Cspg4Q8VHY0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Gm44872-201ENSMUST00000207864 420 ntBASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cspg4Q8VHY0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Gm13186-201ENSMUST00000118031 316 ntBASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Mir8112-201ENSMUST00000184382 131 ntBASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Cspg4Q8VHY0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Gm9727-201ENSMUST00000161387 555 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms