Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.74■□□□□ 0.59
Trim47Q8C0E3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim47Q8C0E3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim47Q8C0E3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Trim47Q8C0E3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim47Q8C0E3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim47Q8C0E3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim47Q8C0E3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Trim47Q8C0E3 Gm13186-201ENSMUST00000118031 316 ntBASIC18.73■□□□□ 0.59
Trim47Q8C0E3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim47Q8C0E3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim47Q8C0E3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim47Q8C0E3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim47Q8C0E3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim47Q8C0E3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim47Q8C0E3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim47Q8C0E3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim47Q8C0E3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Gm5587-201ENSMUST00000206270 674 ntBASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim47Q8C0E3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim47Q8C0E3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim47Q8C0E3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim47Q8C0E3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim47Q8C0E3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim47Q8C0E3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim47Q8C0E3 Gm25016-201ENSMUST00000158399 131 ntBASIC18.71■□□□□ 0.59
Trim47Q8C0E3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim47Q8C0E3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim47Q8C0E3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.71■□□□□ 0.59
Trim47Q8C0E3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim47Q8C0E3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim47Q8C0E3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim47Q8C0E3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.71■□□□□ 0.59
Trim47Q8C0E3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Gm9013-201ENSMUST00000132939 882 ntBASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Gm37722-201ENSMUST00000193757 208 ntBASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim47Q8C0E3 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.69■□□□□ 0.58
Trim47Q8C0E3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim47Q8C0E3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim47Q8C0E3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms