Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Trerf1Q8BXJ2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.83■□□□□ 0.44
Trerf1Q8BXJ2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Gm10517-202ENSMUST00000192970 758 ntBASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trerf1Q8BXJ2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trerf1Q8BXJ2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trerf1Q8BXJ2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trerf1Q8BXJ2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trerf1Q8BXJ2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trerf1Q8BXJ2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trerf1Q8BXJ2 Mir5122-201ENSMUST00000175004 89 ntBASIC17.81■□□□□ 0.44
Trerf1Q8BXJ2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Trerf1Q8BXJ2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.81■□□□□ 0.44
Trerf1Q8BXJ2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trerf1Q8BXJ2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trerf1Q8BXJ2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trerf1Q8BXJ2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trerf1Q8BXJ2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trerf1Q8BXJ2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 Gm37055-201ENSMUST00000191866 133 ntBASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trerf1Q8BXJ2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trerf1Q8BXJ2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Gm4974-201ENSMUST00000209974 875 ntBASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trerf1Q8BXJ2 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.77■□□□□ 0.44
Trerf1Q8BXJ2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.77■□□□□ 0.44
Trerf1Q8BXJ2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trerf1Q8BXJ2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trerf1Q8BXJ2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trerf1Q8BXJ2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trerf1Q8BXJ2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trerf1Q8BXJ2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms