Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh20Q8BIZ0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pcdh20Q8BIZ0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh20Q8BIZ0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh20Q8BIZ0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pcdh20Q8BIZ0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh20Q8BIZ0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.52■□□□□ 0.23
Pcdh20Q8BIZ0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh20Q8BIZ0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh20Q8BIZ0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh20Q8BIZ0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.52■□□□□ 0.23
Pcdh20Q8BIZ0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh20Q8BIZ0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh20Q8BIZ0 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.52■□□□□ 0.23
Pcdh20Q8BIZ0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh20Q8BIZ0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Gm11643-201ENSMUST00000119578 864 ntBASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Mir6982-201ENSMUST00000184354 68 ntBASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh20Q8BIZ0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Gm10418-201ENSMUST00000100943 576 ntBASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.5■□□□□ 0.23
Pcdh20Q8BIZ0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdh20Q8BIZ0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh20Q8BIZ0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms