Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Sdc3Q64519 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.24■□□□□ 0.19
Sdc3Q64519 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.24■□□□□ 0.19
Sdc3Q64519 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.24■□□□□ 0.19
Sdc3Q64519 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.24■□□□□ 0.19
Sdc3Q64519 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdc3Q64519 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdc3Q64519 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdc3Q64519 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdc3Q64519 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sdc3Q64519 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdc3Q64519 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sdc3Q64519 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sdc3Q64519 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.23■□□□□ 0.19
Sdc3Q64519 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.23■□□□□ 0.19
Sdc3Q64519 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.23■□□□□ 0.19
Sdc3Q64519 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sdc3Q64519 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.23■□□□□ 0.19
Sdc3Q64519 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdc3Q64519 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdc3Q64519 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdc3Q64519 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.23■□□□□ 0.19
Sdc3Q64519 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdc3Q64519 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sdc3Q64519 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Sdc3Q64519 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Sdc3Q64519 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdc3Q64519 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Sdc3Q64519 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sdc3Q64519 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdc3Q64519 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdc3Q64519 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdc3Q64519 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdc3Q64519 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.22■□□□□ 0.19
Sdc3Q64519 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Sdc3Q64519 Gm6659-201ENSMUST00000174752 547 ntBASIC16.22■□□□□ 0.19
Sdc3Q64519 Gm22697-201ENSMUST00000175194 63 ntBASIC16.22■□□□□ 0.19
Sdc3Q64519 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.22■□□□□ 0.19
Sdc3Q64519 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdc3Q64519 Gm18032-201ENSMUST00000222541 538 ntBASIC16.22■□□□□ 0.19
Sdc3Q64519 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.22■□□□□ 0.19
Sdc3Q64519 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.22■□□□□ 0.19
Sdc3Q64519 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdc3Q64519 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdc3Q64519 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdc3Q64519 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sdc3Q64519 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Sdc3Q64519 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdc3Q64519 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdc3Q64519 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdc3Q64519 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdc3Q64519 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sdc3Q64519 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdc3Q64519 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdc3Q64519 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Sdc3Q64519 Gm16061-201ENSMUST00000122167 857 ntBASIC16.21■□□□□ 0.19
Sdc3Q64519 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.21■□□□□ 0.19
Sdc3Q64519 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.21■□□□□ 0.19
Sdc3Q64519 Il3ra-202ENSMUST00000223589 738 ntBASIC16.21■□□□□ 0.19
Sdc3Q64519 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdc3Q64519 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdc3Q64519 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sdc3Q64519 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.21■□□□□ 0.19
Sdc3Q64519 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sdc3Q64519 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdc3Q64519 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.21■□□□□ 0.19
Sdc3Q64519 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.21■□□□□ 0.18
Sdc3Q64519 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sdc3Q64519 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdc3Q64519 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdc3Q64519 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdc3Q64519 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Sdc3Q64519 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdc3Q64519 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdc3Q64519 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdc3Q64519 Gm10013-201ENSMUST00000106074 672 ntBASIC16.2■□□□□ 0.18
Sdc3Q64519 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.2■□□□□ 0.18
Sdc3Q64519 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sdc3Q64519 Gm17661-201ENSMUST00000170317 270 ntBASIC16.2■□□□□ 0.18
Sdc3Q64519 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Sdc3Q64519 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sdc3Q64519 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdc3Q64519 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sdc3Q64519 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms