Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Gm43060-201ENSMUST00000200621 289 ntBASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-4Q5R1H9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Mir7075-201ENSMUST00000184187 82 ntBASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7d-4Q5R1H9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Gm40848-201ENSMUST00000221998 324 ntBASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7d-4Q5R1H9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Gm8493-201ENSMUST00000196881 489 ntBASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms