Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne2P59108 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne2P59108 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne2P59108 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne2P59108 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne2P59108 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne2P59108 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne2P59108 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne2P59108 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne2P59108 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.3□□□□□ -0.12
Cpne2P59108 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cpne2P59108 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cpne2P59108 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Gm7290-201ENSMUST00000104990 617 ntBASIC14.3□□□□□ -0.12
Cpne2P59108 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.3□□□□□ -0.12
Cpne2P59108 Gm12918-201ENSMUST00000120234 636 ntBASIC14.3□□□□□ -0.12
Cpne2P59108 Gm15710-201ENSMUST00000121821 636 ntBASIC14.3□□□□□ -0.12
Cpne2P59108 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Gm5075-201ENSMUST00000196916 622 ntBASIC14.3□□□□□ -0.12
Cpne2P59108 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.3□□□□□ -0.12
Cpne2P59108 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.3□□□□□ -0.12
Cpne2P59108 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cpne2P59108 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cpne2P59108 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cpne2P59108 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cpne2P59108 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne2P59108 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne2P59108 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne2P59108 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cpne2P59108 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne2P59108 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cpne2P59108 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne2P59108 Gm6211-202ENSMUST00000167849 925 ntBASIC14.29□□□□□ -0.12
Cpne2P59108 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne2P59108 Gm7291-201ENSMUST00000199147 382 ntBASIC14.29□□□□□ -0.12
Cpne2P59108 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.29□□□□□ -0.12
Cpne2P59108 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.29□□□□□ -0.12
Cpne2P59108 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne2P59108 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne2P59108 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne2P59108 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne2P59108 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.29□□□□□ -0.12
Cpne2P59108 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.29□□□□□ -0.12
Cpne2P59108 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne2P59108 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne2P59108 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Cpne2P59108 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne2P59108 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne2P59108 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne2P59108 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne2P59108 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne2P59108 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne2P59108 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne2P59108 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.28□□□□□ -0.12
Cpne2P59108 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne2P59108 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.28□□□□□ -0.12
Cpne2P59108 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne2P59108 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne2P59108 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne2P59108 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cpne2P59108 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cpne2P59108 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne2P59108 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne2P59108 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne2P59108 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Cpne2P59108 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne2P59108 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpne2P59108 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Cpne2P59108 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cpne2P59108 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cpne2P59108 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.27□□□□□ -0.12
Cpne2P59108 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cpne2P59108 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Cpne2P59108 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.27□□□□□ -0.12
Cpne2P59108 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne2P59108 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne2P59108 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne2P59108 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne2P59108 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne2P59108 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne2P59108 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpne2P59108 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Cpne2P59108 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms