Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh11P55288 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Cdh11P55288 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.43■□□□□ 0.06
Cdh11P55288 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh11P55288 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh11P55288 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh11P55288 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh11P55288 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.43■□□□□ 0.06
Cdh11P55288 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cdh11P55288 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh11P55288 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh11P55288 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh11P55288 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cdh11P55288 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh11P55288 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh11P55288 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh11P55288 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cdh11P55288 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.42■□□□□ 0.06
Cdh11P55288 Mir1199-201ENSMUST00000117015 119 ntBASIC15.42■□□□□ 0.06
Cdh11P55288 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdh11P55288 Mir8112-201ENSMUST00000184382 131 ntBASIC15.42■□□□□ 0.06
Cdh11P55288 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdh11P55288 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.42■□□□□ 0.06
Cdh11P55288 Gm10138-203ENSMUST00000206952 366 ntBASIC15.42■□□□□ 0.06
Cdh11P55288 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Cdh11P55288 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh11P55288 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh11P55288 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh11P55288 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh11P55288 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh11P55288 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh11P55288 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh11P55288 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh11P55288 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.41■□□□□ 0.06
Cdh11P55288 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh11P55288 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.41■□□□□ 0.06
Cdh11P55288 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh11P55288 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh11P55288 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh11P55288 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh11P55288 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh11P55288 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh11P55288 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh11P55288 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh11P55288 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh11P55288 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh11P55288 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh11P55288 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cdh11P55288 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh11P55288 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh11P55288 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh11P55288 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh11P55288 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh11P55288 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Cdh11P55288 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.4■□□□□ 0.06
Cdh11P55288 Gm38285-201ENSMUST00000192928 922 ntBASIC15.4■□□□□ 0.06
Cdh11P55288 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.4■□□□□ 0.06
Cdh11P55288 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Cdh11P55288 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.4■□□□□ 0.06
Cdh11P55288 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh11P55288 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cdh11P55288 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh11P55288 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cdh11P55288 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cdh11P55288 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Cdh11P55288 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh11P55288 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh11P55288 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh11P55288 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh11P55288 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Cdh11P55288 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cdh11P55288 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh11P55288 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh11P55288 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh11P55288 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cdh11P55288 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh11P55288 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cdh11P55288 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh11P55288 Gm15375-201ENSMUST00000119510 849 ntBASIC15.39■□□□□ 0.05
Cdh11P55288 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.39■□□□□ 0.05
Cdh11P55288 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.39■□□□□ 0.05
Cdh11P55288 Gm29791-202ENSMUST00000207888 369 ntBASIC15.39■□□□□ 0.05
Cdh11P55288 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh11P55288 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Cdh11P55288 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh11P55288 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.39■□□□□ 0.05
Cdh11P55288 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.39■□□□□ 0.05
Cdh11P55288 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh11P55288 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.39■□□□□ 0.05
Cdh11P55288 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh11P55288 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh11P55288 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh11P55288 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Cdh11P55288 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh11P55288 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh11P55288 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.38■□□□□ 0.05
Cdh11P55288 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh11P55288 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh11P55288 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cdh11P55288 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms