Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lbx1P52955 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lbx1P52955 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lbx1P52955 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lbx1P52955 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lbx1P52955 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.31■□□□□ 0.2
Lbx1P52955 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lbx1P52955 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lbx1P52955 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lbx1P52955 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lbx1P52955 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lbx1P52955 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lbx1P52955 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.31■□□□□ 0.2
Lbx1P52955 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.31■□□□□ 0.2
Lbx1P52955 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lbx1P52955 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lbx1P52955 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lbx1P52955 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lbx1P52955 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lbx1P52955 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lbx1P52955 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lbx1P52955 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Lbx1P52955 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.3■□□□□ 0.2
Lbx1P52955 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lbx1P52955 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Lbx1P52955 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.3■□□□□ 0.2
Lbx1P52955 Gm11780-201ENSMUST00000136880 516 ntBASIC16.3■□□□□ 0.2
Lbx1P52955 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.3■□□□□ 0.2
Lbx1P52955 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.3■□□□□ 0.2
Lbx1P52955 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.3■□□□□ 0.2
Lbx1P52955 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lbx1P52955 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lbx1P52955 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lbx1P52955 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.29■□□□□ 0.2
Lbx1P52955 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lbx1P52955 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lbx1P52955 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lbx1P52955 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lbx1P52955 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.29■□□□□ 0.2
Lbx1P52955 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lbx1P52955 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lbx1P52955 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Lbx1P52955 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lbx1P52955 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lbx1P52955 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lbx1P52955 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lbx1P52955 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lbx1P52955 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.29■□□□□ 0.2
Lbx1P52955 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lbx1P52955 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.29■□□□□ 0.2
Lbx1P52955 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lbx1P52955 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Lbx1P52955 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lbx1P52955 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.28■□□□□ 0.2
Lbx1P52955 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.28■□□□□ 0.2
Lbx1P52955 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.28■□□□□ 0.2
Lbx1P52955 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.28■□□□□ 0.2
Lbx1P52955 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lbx1P52955 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lbx1P52955 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lbx1P52955 Rarb-207ENSMUST00000225921 2756 ntBASIC16.27■□□□□ 0.2
Lbx1P52955 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms