Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atp6v1aP50516 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.27■□□□□ 0.84
Atp6v1aP50516 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp6v1aP50516 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp6v1aP50516 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp6v1aP50516 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp6v1aP50516 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp6v1aP50516 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp6v1aP50516 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp6v1aP50516 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp6v1aP50516 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp6v1aP50516 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.27■□□□□ 0.84
Atp6v1aP50516 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.27■□□□□ 0.84
Atp6v1aP50516 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.27■□□□□ 0.84
Atp6v1aP50516 Gm27525-201ENSMUST00000184465 107 ntBASIC20.27■□□□□ 0.84
Atp6v1aP50516 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.27■□□□□ 0.84
Atp6v1aP50516 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.27■□□□□ 0.84
Atp6v1aP50516 Gm44450-201ENSMUST00000199528 114 ntBASIC20.27■□□□□ 0.84
Atp6v1aP50516 Gm18206-201ENSMUST00000207027 926 ntBASIC20.27■□□□□ 0.84
Atp6v1aP50516 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp6v1aP50516 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Atp6v1aP50516 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Atp6v1aP50516 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Atp6v1aP50516 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp6v1aP50516 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Atp6v1aP50516 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atp6v1aP50516 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.26■□□□□ 0.83
Atp6v1aP50516 Gm29707-201ENSMUST00000196325 491 ntBASIC20.26■□□□□ 0.83
Atp6v1aP50516 Gm18421-201ENSMUST00000204122 625 ntBASIC20.26■□□□□ 0.83
Atp6v1aP50516 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.26■□□□□ 0.83
Atp6v1aP50516 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.26■□□□□ 0.83
Atp6v1aP50516 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Atp6v1aP50516 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp6v1aP50516 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.26■□□□□ 0.83
Atp6v1aP50516 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp6v1aP50516 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp6v1aP50516 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Atp6v1aP50516 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6v1aP50516 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6v1aP50516 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6v1aP50516 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.25■□□□□ 0.83
Atp6v1aP50516 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6v1aP50516 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.25■□□□□ 0.83
Atp6v1aP50516 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.25■□□□□ 0.83
Atp6v1aP50516 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6v1aP50516 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6v1aP50516 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6v1aP50516 Rarb-207ENSMUST00000225921 2756 ntBASIC20.25■□□□□ 0.83
Atp6v1aP50516 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6v1aP50516 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6v1aP50516 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6v1aP50516 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6v1aP50516 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6v1aP50516 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp6v1aP50516 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6v1aP50516 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6v1aP50516 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6v1aP50516 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6v1aP50516 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6v1aP50516 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.24■□□□□ 0.83
Atp6v1aP50516 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6v1aP50516 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6v1aP50516 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6v1aP50516 Gm2651-201ENSMUST00000203560 838 ntBASIC20.24■□□□□ 0.83
Atp6v1aP50516 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.24■□□□□ 0.83
Atp6v1aP50516 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.24■□□□□ 0.83
Atp6v1aP50516 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6v1aP50516 Rps4l-201ENSMUST00000071745 943 ntBASIC20.24■□□□□ 0.83
Atp6v1aP50516 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6v1aP50516 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6v1aP50516 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Atp6v1aP50516 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Atp6v1aP50516 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Atp6v1aP50516 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp6v1aP50516 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.23■□□□□ 0.83
Atp6v1aP50516 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6v1aP50516 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.23■□□□□ 0.83
Atp6v1aP50516 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6v1aP50516 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.23■□□□□ 0.83
Atp6v1aP50516 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.23■□□□□ 0.83
Atp6v1aP50516 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6v1aP50516 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
Atp6v1aP50516 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6v1aP50516 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6v1aP50516 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6v1aP50516 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.23■□□□□ 0.83
Atp6v1aP50516 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6v1aP50516 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6v1aP50516 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Atp6v1aP50516 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6v1aP50516 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atp6v1aP50516 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.22■□□□□ 0.83
Atp6v1aP50516 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms