Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Slc6a20bO88575 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Slc6a20bO88575 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a20bO88575 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
Slc6a20bO88575 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a20bO88575 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.42■□□□□ 0.54
Slc6a20bO88575 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.42■□□□□ 0.54
Slc6a20bO88575 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.42■□□□□ 0.54
Slc6a20bO88575 Psmb5-202ENSMUST00000227257 622 ntBASIC18.42■□□□□ 0.54
Slc6a20bO88575 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a20bO88575 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a20bO88575 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a20bO88575 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Slc6a20bO88575 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a20bO88575 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a20bO88575 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Slc6a20bO88575 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.41■□□□□ 0.54
Slc6a20bO88575 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a20bO88575 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.41■□□□□ 0.54
Slc6a20bO88575 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a20bO88575 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a20bO88575 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Slc6a20bO88575 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Slc6a20bO88575 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.4■□□□□ 0.54
Slc6a20bO88575 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a20bO88575 Gm23935-201ENSMUST00000102303 57 ntBASIC18.4■□□□□ 0.54
Slc6a20bO88575 Gm24270-201ENSMUST00000102326 57 ntBASIC18.4■□□□□ 0.54
Slc6a20bO88575 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.4■□□□□ 0.54
Slc6a20bO88575 Gm24245-201ENSMUST00000157318 57 ntBASIC18.4■□□□□ 0.54
Slc6a20bO88575 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.4■□□□□ 0.54
Slc6a20bO88575 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a20bO88575 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a20bO88575 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a20bO88575 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a20bO88575 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a20bO88575 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Slc6a20bO88575 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a20bO88575 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a20bO88575 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slc6a20bO88575 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slc6a20bO88575 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a20bO88575 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a20bO88575 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.38■□□□□ 0.53
Slc6a20bO88575 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a20bO88575 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a20bO88575 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.37■□□□□ 0.53
Slc6a20bO88575 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms