Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl35aO55142 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl35aO55142 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl35aO55142 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl35aO55142 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Rpl35aO55142 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.62□□□□□ -0.39
Rpl35aO55142 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl35aO55142 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl35aO55142 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
Rpl35aO55142 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.61□□□□□ -0.39
Rpl35aO55142 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl35aO55142 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.61□□□□□ -0.39
Rpl35aO55142 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.61□□□□□ -0.39
Rpl35aO55142 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.61□□□□□ -0.39
Rpl35aO55142 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl35aO55142 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rpl35aO55142 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rpl35aO55142 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rpl35aO55142 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl35aO55142 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.61□□□□□ -0.39
Rpl35aO55142 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.61□□□□□ -0.39
Rpl35aO55142 Gm18959-201ENSMUST00000208954 655 ntBASIC12.61□□□□□ -0.39
Rpl35aO55142 Gm9731-201ENSMUST00000209480 747 ntBASIC12.61□□□□□ -0.39
Rpl35aO55142 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl35aO55142 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl35aO55142 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl35aO55142 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl35aO55142 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl35aO55142 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl35aO55142 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rpl35aO55142 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl35aO55142 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl35aO55142 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl35aO55142 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl35aO55142 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rpl35aO55142 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rpl35aO55142 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.6□□□□□ -0.39
Rpl35aO55142 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl35aO55142 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rpl35aO55142 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl35aO55142 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl35aO55142 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.6□□□□□ -0.39
Rpl35aO55142 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Rpl35aO55142 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.6□□□□□ -0.39
Rpl35aO55142 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl35aO55142 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl35aO55142 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl35aO55142 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rpl35aO55142 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl35aO55142 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl35aO55142 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl35aO55142 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl35aO55142 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.59□□□□□ -0.39
Rpl35aO55142 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.59□□□□□ -0.39
Rpl35aO55142 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl35aO55142 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl35aO55142 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.59□□□□□ -0.39
Rpl35aO55142 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl35aO55142 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl35aO55142 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl35aO55142 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.59□□□□□ -0.39
Rpl35aO55142 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.59□□□□□ -0.39
Rpl35aO55142 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Rpl35aO55142 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl35aO55142 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rpl35aO55142 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl35aO55142 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.59□□□□□ -0.39
Rpl35aO55142 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl35aO55142 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.59□□□□□ -0.39
Rpl35aO55142 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl35aO55142 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl35aO55142 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.59□□□□□ -0.39
Rpl35aO55142 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl35aO55142 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl35aO55142 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.59□□□□□ -0.39
Rpl35aO55142 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rpl35aO55142 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rpl35aO55142 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Rpl35aO55142 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl35aO55142 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rpl35aO55142 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl35aO55142 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl35aO55142 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl35aO55142 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl35aO55142 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC12.58□□□□□ -0.4
Rpl35aO55142 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rpl35aO55142 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.58□□□□□ -0.4
Rpl35aO55142 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl35aO55142 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl35aO55142 Mir5130-201ENSMUST00000175160 84 ntBASIC12.58□□□□□ -0.4
Rpl35aO55142 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.58□□□□□ -0.4
Rpl35aO55142 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.58□□□□□ -0.4
Rpl35aO55142 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl35aO55142 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl35aO55142 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.58□□□□□ -0.4
Rpl35aO55142 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl35aO55142 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Rpl35aO55142 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Rpl35aO55142 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl35aO55142 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms