Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca4O35600 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Abca4O35600 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.87■□□□□ 0.13
Abca4O35600 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Abca4O35600 Gm44335-201ENSMUST00000196879 141 ntBASIC15.87■□□□□ 0.13
Abca4O35600 Gm44297-201ENSMUST00000198304 141 ntBASIC15.87■□□□□ 0.13
Abca4O35600 Gm44346-201ENSMUST00000198851 141 ntBASIC15.87■□□□□ 0.13
Abca4O35600 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca4O35600 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Abca4O35600 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca4O35600 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca4O35600 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca4O35600 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca4O35600 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Abca4O35600 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca4O35600 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abca4O35600 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Abca4O35600 Gm14127-201ENSMUST00000117906 678 ntBASIC15.86■□□□□ 0.13
Abca4O35600 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.86■□□□□ 0.13
Abca4O35600 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.86■□□□□ 0.13
Abca4O35600 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.86■□□□□ 0.13
Abca4O35600 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.86■□□□□ 0.13
Abca4O35600 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abca4O35600 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abca4O35600 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abca4O35600 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abca4O35600 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abca4O35600 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.86■□□□□ 0.13
Abca4O35600 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abca4O35600 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abca4O35600 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.86■□□□□ 0.13
Abca4O35600 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abca4O35600 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abca4O35600 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abca4O35600 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abca4O35600 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Abca4O35600 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.86■□□□□ 0.13
Abca4O35600 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.86■□□□□ 0.13
Abca4O35600 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Abca4O35600 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Tgds-204ENSMUST00000228543 1594 ntBASIC15.85■□□□□ 0.13
Abca4O35600 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Abca4O35600 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Abca4O35600 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.85■□□□□ 0.13
Abca4O35600 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.85■□□□□ 0.13
Abca4O35600 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Abca4O35600 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.85■□□□□ 0.13
Abca4O35600 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca4O35600 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca4O35600 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca4O35600 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Abca4O35600 Gm12497-201ENSMUST00000138778 237 ntBASIC15.84■□□□□ 0.13
Abca4O35600 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca4O35600 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca4O35600 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca4O35600 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Abca4O35600 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca4O35600 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca4O35600 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Abca4O35600 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Abca4O35600 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca4O35600 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Abca4O35600 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca4O35600 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Abca4O35600 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Abca4O35600 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Abca4O35600 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Abca4O35600 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Abca4O35600 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Abca4O35600 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Abca4O35600 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Abca4O35600 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.83■□□□□ 0.12
Abca4O35600 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Abca4O35600 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Abca4O35600 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Abca4O35600 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Abca4O35600 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Abca4O35600 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Abca4O35600 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Abca4O35600 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Abca4O35600 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Abca4O35600 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Abca4O35600 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Abca4O35600 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms