Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1cO08604 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1cO08604 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Raet1cO08604 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1cO08604 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Raet1cO08604 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1cO08604 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1cO08604 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.1■□□□□ 0.01
Raet1cO08604 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1cO08604 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.1■□□□□ 0.01
Raet1cO08604 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
Raet1cO08604 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1cO08604 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1cO08604 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1cO08604 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1cO08604 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Raet1cO08604 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1cO08604 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.1■□□□□ 0.01
Raet1cO08604 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Raet1cO08604 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1cO08604 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1cO08604 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Raet1cO08604 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.09■□□□□ 0.01
Raet1cO08604 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.09■□□□□ 0.01
Raet1cO08604 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.09■□□□□ 0.01
Raet1cO08604 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.09■□□□□ 0.01
Raet1cO08604 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.09■□□□□ 0.01
Raet1cO08604 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.09■□□□□ 0.01
Raet1cO08604 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.09■□□□□ 0.01
Raet1cO08604 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.09■□□□□ 0.01
Raet1cO08604 Odf3b-204ENSMUST00000227834 930 ntBASIC15.09■□□□□ 0.01
Raet1cO08604 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Raet1cO08604 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Raet1cO08604 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.09■□□□□ 0.01
Raet1cO08604 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1cO08604 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.08■□□□□ 0.01
Raet1cO08604 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Raet1cO08604 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1cO08604 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.08■□□□□ 0
Raet1cO08604 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Raet1cO08604 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1cO08604 Gm13216-201ENSMUST00000117145 591 ntBASIC15.08■□□□□ 0
Raet1cO08604 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.08■□□□□ 0
Raet1cO08604 Mir5122-201ENSMUST00000175004 89 ntBASIC15.08■□□□□ 0
Raet1cO08604 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.08■□□□□ 0
Raet1cO08604 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.08■□□□□ 0
Raet1cO08604 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.08■□□□□ 0
Raet1cO08604 Gm3375-201ENSMUST00000203929 796 ntBASIC15.08■□□□□ 0
Raet1cO08604 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1cO08604 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1cO08604 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1cO08604 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1cO08604 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1cO08604 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1cO08604 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Raet1cO08604 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.07■□□□□ 0
Raet1cO08604 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.07■□□□□ 0
Raet1cO08604 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.07■□□□□ 0
Raet1cO08604 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.07■□□□□ 0
Raet1cO08604 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.07■□□□□ 0
Raet1cO08604 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.07■□□□□ 0
Raet1cO08604 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1cO08604 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.06■□□□□ 0
Raet1cO08604 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.06■□□□□ 0
Raet1cO08604 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1cO08604 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms