Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.74□□□□□ -0.21
Gm12887B1AVM1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.74□□□□□ -0.21
Gm12887B1AVM1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm12887B1AVM1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm12887B1AVM1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gm12887B1AVM1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm12887B1AVM1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm12887B1AVM1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.73□□□□□ -0.21
Gm12887B1AVM1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.73□□□□□ -0.21
Gm12887B1AVM1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gm12887B1AVM1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm12887B1AVM1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Gm12887B1AVM1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm12887B1AVM1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm12887B1AVM1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Gm12887B1AVM1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Gm12887B1AVM1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm12887B1AVM1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Gm12887B1AVM1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Gm12887B1AVM1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Gm12887B1AVM1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Gm12887B1AVM1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms