Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv8-27A0A0G2JF28 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC10.66□□□□□ -0.7
Igkv8-27A0A0G2JF28 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Gm43272-201ENSMUST00000200599 1584 ntBASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Gm9207-201ENSMUST00000198773 1115 ntBASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Gm42501-201ENSMUST00000200220 1026 ntBASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC10.65□□□□□ -0.7
Igkv8-27A0A0G2JF28 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv8-27A0A0G2JF28 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv8-27A0A0G2JF28 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv8-27A0A0G2JF28 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC10.65□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv8-27A0A0G2JF28 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv8-27A0A0G2JF28 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv8-27A0A0G2JF28 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Igkv8-27A0A0G2JF28 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms