Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav4-3A0A0B4J1K1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.57□□□□□ -0.56
Trav4-3A0A0B4J1K1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Gm43173-201ENSMUST00000202246 593 ntBASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4-3A0A0B4J1K1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms