Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13-2A0A075B649 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Gm6365-201ENSMUST00000054711 744 ntBASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13-2A0A075B649 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13-2A0A075B649 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13-2A0A075B649 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trav13-2A0A075B649 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.4□□□□□ -0.59
Trav13-2A0A075B649 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Trav13-2A0A075B649 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13-2A0A075B649 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13-2A0A075B649 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13-2A0A075B649 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-2A0A075B649 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms