Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7n-4A0A075B620 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7n-4A0A075B620 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav7n-4A0A075B620 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Trav7n-4A0A075B620 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7n-4A0A075B620 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Gm26833-201ENSMUST00000180899 440 ntBASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7n-4A0A075B620 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.84□□□□□ -0.35
Trav7n-4A0A075B620 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav7n-4A0A075B620 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.83□□□□□ -0.35
Trav7n-4A0A075B620 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Trav7n-4A0A075B620 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav7n-4A0A075B620 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms