Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AL355834.1-201ENST00000556602 3965 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 PPIAP24-201ENST00000328558 471 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 MTCO2P31-201ENST00000402702 684 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 UBE2V1P9-201ENST00000414760 368 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 HIGD1AP15-201ENST00000416198 280 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC006509.1-201ENST00000420788 634 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 RPL12P28-201ENST00000430852 489 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC083855.1-201ENST00000440041 258 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 NPM1P23-201ENST00000440193 849 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC079922.1-201ENST00000443291 359 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 MTCYBP21-201ENST00000443300 1113 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AL591719.1-201ENST00000444669 744 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 UBBP5-201ENST00000446970 266 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 CYCSP20-201ENST00000473154 315 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 RN7SL70P-201ENST00000478322 302 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 RPL29P23-201ENST00000486188 442 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 HMGB1P38-201ENST00000490557 577 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AL035690.1-201ENST00000490892 383 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC082651.2-201ENST00000496833 166 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 PFN1P8-201ENST00000497012 543 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 RNA5SP473-201ENST00000516402 125 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 NPM1P5-201ENST00000557228 838 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 OR4C49P-201ENST00000563891 900 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC124283.4-201ENST00000581815 456 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC090616.1-201ENST00000583895 447 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AL022067.1-201ENST00000602426 454 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC009237.12-201ENST00000604755 742 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AL450336.1-201ENST00000605180 586 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AL390877.1-201ENST00000605704 214 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AP002802.2-201ENST00000605877 235 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AL157392.4-201ENST00000609756 345 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AL355493.4-201ENST00000618530 292 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC022079.1-201ENST00000621546 602 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
AMBRA1Q9C0C7 RNA5SP122-201ENST00000384457 108 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms