Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AC004815.1-201ENST00000484185 331 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AL591122.1-201ENST00000487348 492 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AC109927.2-201ENST00000506416 303 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AC110775.1-201ENST00000513721 462 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 IGHV3-57-201ENST00000520143 280 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AP001803.1-201ENST00000525668 147 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 OR8I1P-201ENST00000529291 931 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AC008147.3-201ENST00000548666 354 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AC087897.1-201ENST00000550134 156 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AC026458.1-201ENST00000564330 438 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AC010287.1-201ENST00000566916 357 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AC011497.2-201ENST00000600255 639 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AL354976.1-201ENST00000613843 387 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 RN7SL126P-201ENST00000616400 299 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AC010975.3-201ENST00000618727 978 ntBASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
FOXP3Q9BZS1 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 Y_RNA.77-201ENST00000362962 107 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 MIR551B-201ENST00000384984 96 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 RPS3AP26-201ENST00000398259 784 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 RPL7P27-201ENST00000403775 720 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AL663061.1-201ENST00000416625 580 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 PTP4A1P5-201ENST00000420305 455 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 PUDPP2-201ENST00000431423 643 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 OTX2P1-201ENST00000450956 354 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 RNU7-157P-201ENST00000459600 66 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 MTND3P7-201ENST00000474435 343 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 RN7SL379P-201ENST00000479912 293 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC083906.1-201ENST00000509298 406 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 RNA5SP116-201ENST00000516132 98 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC105185.1-201ENST00000518705 535 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 MTCO1P49-201ENST00000523429 802 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 OR4A40P-201ENST00000533878 948 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC006518.2-201ENST00000542513 940 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC093524.1-201ENST00000564266 1094 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC018558.5-201ENST00000565840 952 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 EIF4A3P1-201ENST00000578499 647 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 RN7SL66P-201ENST00000582099 264 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC020914.7-201ENST00000594477 545 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC124312.4-201ENST00000605533 310 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC024589.2-201ENST00000605642 1294 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AC004908.1-201ENST00000606572 541 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AL450489.1-201ENST00000612071 468 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AK6-205ENST00000618980 483 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AL158163.2-201ENST00000619110 700 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 AL354718.1-201ENST00000619764 589 ntBASIC6.95□□□□□ -1.3
FOXP3Q9BZS1 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms