Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 AL359955.2-201ENST00000445380 353 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 ACA64.1-201ENST00000459171 127 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 RNU1-88P-201ENST00000459274 128 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 RN7SL197P-201ENST00000466981 299 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 AC006539.1-201ENST00000481419 501 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL21A1Q96P44 SNORA70.11-201ENST00000515987 138 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 SNORA70.13-201ENST00000516116 138 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 AC084824.2-201ENST00000548906 345 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 AC126615.2-201ENST00000553003 515 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 SETP3-201ENST00000581726 813 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 AC067773.1-201ENST00000603284 1094 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 AC022400.9-201ENST00000623633 273 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL21A1Q96P44 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL21A1Q96P44 PARP4P2-201ENST00000446672 3326 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL21A1Q96P44 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 FBXL21-201ENST00000297158 1305 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL21A1Q96P44 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.44□□□□□ -1.54
COL21A1Q96P44 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.44□□□□□ -1.54
COL21A1Q96P44 AC006600.2-201ENST00000624834 2506 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL21A1Q96P44 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL21A1Q96P44 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL21A1Q96P44 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
COL21A1Q96P44 RNA5SP273-201ENST00000362484 113 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 RN7SKP78-201ENST00000364711 318 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 AC087752.1-201ENST00000391360 558 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 DPPA2P2-201ENST00000418220 897 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.44□□□□□ -1.54
COL21A1Q96P44 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.44□□□□□ -1.54
COL21A1Q96P44 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL21A1Q96P44 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.44□□□□□ -1.54
COL21A1Q96P44 AC023141.8-201ENST00000442554 208 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 AC023271.1-201ENST00000445936 1090 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 AL359839.1-201ENST00000451975 1160 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 AC004129.2-201ENST00000457229 287 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 AC099521.1-201ENST00000482557 334 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 AC012123.2-201ENST00000485809 248 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 AC105420.1-201ENST00000504389 582 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 GAPDHP71-201ENST00000511530 1003 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 Y_RNA.667-201ENST00000516212 107 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 AC060775.1-201ENST00000518241 520 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.44□□□□□ -1.54
COL21A1Q96P44 OR5D2P-201ENST00000524390 911 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 TRIM77BP-201ENST00000524985 1119 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.44□□□□□ -1.54
COL21A1Q96P44 PCNAP4-201ENST00000532690 730 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 OR4A43P-201ENST00000532938 908 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.44□□□□□ -1.54
COL21A1Q96P44 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.44□□□□□ -1.54
COL21A1Q96P44 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.44□□□□□ -1.54
COL21A1Q96P44 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL21A1Q96P44 AC145423.1-201ENST00000605712 336 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL21A1Q96P44 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL21A1Q96P44 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
COL21A1Q96P44 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL21A1Q96P44 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.44□□□□□ -1.54
COL21A1Q96P44 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL21A1Q96P44 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL21A1Q96P44 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL21A1Q96P44 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL21A1Q96P44 RN7SKP185-201ENST00000362813 326 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 AL354890.1-201ENST00000413730 346 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 AC066692.1-201ENST00000421721 457 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 BX119904.3-201ENST00000428194 957 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 DNAJA1P5-201ENST00000440278 943 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 MED28P3-201ENST00000444288 531 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 HMGN1P2-201ENST00000445197 310 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 DEFB109A-201ENST00000482450 265 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 RN7SL57P-201ENST00000493687 290 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 OR7E157P-201ENST00000494376 911 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 RNA5SP438-201ENST00000516561 112 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 MIR4310-201ENST00000582950 57 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.43□□□□□ -1.54
COL21A1Q96P44 RPL12P48-201ENST00000605620 304 ntBASIC5.43□□□□□ -1.54
COL21A1Q96P44 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms