Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 COX6B1P3-201ENST00000312310 260 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 RNA5SP232-201ENST00000364144 119 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 RNU6-729P-201ENST00000384399 107 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 MTCO1P51-201ENST00000427672 1060 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 DEFA9P-201ENST00000433042 285 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 ATP5LP2-201ENST00000440646 311 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 REG1CP-206ENST00000447469 496 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AC005165.2-201ENST00000466070 380 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AL122020.1-201ENST00000472287 459 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 SNRPCP3-201ENST00000474888 476 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AC122718.2-201ENST00000505325 591 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 GAPDHP71-201ENST00000511530 1003 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 RN7SKP183-201ENST00000517169 324 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AC136777.2-201ENST00000522979 358 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AL356801.1-201ENST00000559320 294 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 ZNF322P1-201ENST00000568013 1209 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 MIR4776-2-201ENST00000580204 80 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AC091167.5-201ENST00000605689 894 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AL451049.1-201ENST00000608672 497 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AC022400.9-201ENST00000623633 273 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AC083837.1-201ENST00000565297 2994 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 CASC19-260ENST00000641828 2001 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AC003985.2-201ENST00000562268 1669 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 AF287957.1-201ENST00000607368 1595 ntBASIC5.72□□□□□ -1.49
PDLIM5Q96HC4 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
PDLIM5Q96HC4 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PDLIM5Q96HC4 PARP4P2-201ENST00000446672 3326 ntBASIC5.71□□□□□ -1.49
PDLIM5Q96HC4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDLIM5Q96HC4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 RNA5SP91-201ENST00000390902 119 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 BX284632.2-201ENST00000421091 399 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 MGAT2P2-201ENST00000427194 797 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AC007679.3-201ENST00000434035 414 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 CLNS1AP1-201ENST00000435954 682 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AL512605.1-202ENST00000441919 381 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AL359955.2-201ENST00000445380 353 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AC118758.1-202ENST00000454719 225 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 Z83838.1-202ENST00000456225 839 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms