Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFT1Q96AA3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC018717.1-201ENST00000457712 1505 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 RN7SKP185-201ENST00000362813 326 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 RPL11P3-201ENST00000395256 523 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 AJ239321.1-201ENST00000424255 564 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 RPSAP65-201ENST00000429660 595 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC128677.1-201ENST00000436016 442 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC010086.1-201ENST00000437359 1052 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 RPL5P25-201ENST00000441148 775 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 OR2L9P-201ENST00000444456 913 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC234771.2-201ENST00000445718 597 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 RAB28P3-201ENST00000448325 597 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 HIGD1AP16-201ENST00000450986 258 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 RPS4XP12-201ENST00000461747 709 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 RPL23AP40-201ENST00000487630 390 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 TDGP1-201ENST00000543961 1229 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC009962.1-201ENST00000567327 3813 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC090826.1-203ENST00000569235 490 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 RN7SL66P-201ENST00000582099 264 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC012368.3-201ENST00000604190 219 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC141002.1-201ENST00000607025 279 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 SNORA74.4-201ENST00000607595 199 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 AL451049.1-201ENST00000608672 497 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 MIR6885-201ENST00000612241 66 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC007786.3-201ENST00000615154 596 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 MIR6811-201ENST00000620409 58 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC024884.1-201ENST00000620583 399 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC025262.3-201ENST00000623666 360 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 CASC19-248ENST00000641674 1356 ntBASIC5.23□□□□□ -1.57
RFT1Q96AA3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFT1Q96AA3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
RFT1Q96AA3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 NPM1P10-201ENST00000398310 865 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 RN7SKP166-201ENST00000410812 305 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 SEPT7P8-201ENST00000413308 775 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms