Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.35□□□□□ -1.55
SCN1BQ07699 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.35□□□□□ -1.55
SCN1BQ07699 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN1BQ07699 AL663074.2-201ENST00000440621 479 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN1BQ07699 HMGN1P32-201ENST00000441744 256 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 CYCSP51-201ENST00000443545 318 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.35□□□□□ -1.55
SCN1BQ07699 MED28P3-201ENST00000444288 531 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN1BQ07699 AC073594.1-201ENST00000462065 364 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SCN1BQ07699 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCN1BQ07699 RN7SL714P-201ENST00000487050 298 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN1BQ07699 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.35□□□□□ -1.55
SCN1BQ07699 AC131935.1-201ENST00000524621 333 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 OR8X1P-201ENST00000534542 869 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 AP002373.2-201ENST00000541631 1060 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.35□□□□□ -1.55
SCN1BQ07699 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN1BQ07699 AC084824.2-201ENST00000548906 345 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.35□□□□□ -1.55
SCN1BQ07699 RPL3P13-201ENST00000550415 216 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 AC009852.2-201ENST00000567898 485 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 AC027796.1-201ENST00000575593 512 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 AC027229.1-201ENST00000583887 253 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 AC010487.1-201ENST00000594408 1172 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 AL589863.1-201ENST00000595383 631 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCN1BQ07699 AC004805.3-201ENST00000603178 310 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 AC034236.3-201ENST00000605999 461 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 Z95327.3-201ENST00000610385 572 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 MIR6503-201ENST00000622884 86 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 AC138965.3-201ENST00000623875 498 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.35□□□□□ -1.55
SCN1BQ07699 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN1BQ07699 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN1BQ07699 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN1BQ07699 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCN1BQ07699 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCN1BQ07699 AP001284.1-201ENST00000528393 2118 ntBASIC5.35□□□□□ -1.55
SCN1BQ07699 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCN1BQ07699 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCN1BQ07699 AC125336.1-201ENST00000508893 2827 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCN1BQ07699 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SCN1BQ07699 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN1BQ07699 MAPK10-338ENST00000641647 3362 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.34□□□□□ -1.55
SCN1BQ07699 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SCN1BQ07699 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SCN1BQ07699 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SCN1BQ07699 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SCN1BQ07699 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCN1BQ07699 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN1BQ07699 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.34□□□□□ -1.55
SCN1BQ07699 AL445238.1-204ENST00000400311 463 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 AL589655.1-201ENST00000405398 482 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 SNORA77.2-201ENST00000408571 112 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN1BQ07699 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN1BQ07699 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN1BQ07699 AL606490.7-201ENST00000433136 191 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 COL11A2P1-205ENST00000441798 676 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.34□□□□□ -1.55
SCN1BQ07699 AL020997.1-201ENST00000446554 349 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 CFL1P4-201ENST00000451536 498 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN1BQ07699 NPM1P9-201ENST00000453156 844 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 RSU1P1-201ENST00000453416 441 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 RN7SL790P-201ENST00000474043 298 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 RPL12P24-201ENST00000474907 486 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.34□□□□□ -1.55
SCN1BQ07699 AC124945.1-201ENST00000485133 188 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SCN1BQ07699 AC090543.1-201ENST00000492168 485 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 AC122714.1-201ENST00000502510 459 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 AC021146.7-201ENST00000509604 775 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 AC010343.2-201ENST00000510162 224 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 IMPA1P1-201ENST00000510718 842 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 AC034244.2-201ENST00000514668 858 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SCN1BQ07699 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN1BQ07699 RNA5SP96-201ENST00000516041 107 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.34□□□□□ -1.55
SCN1BQ07699 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.34□□□□□ -1.55
SCN1BQ07699 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SCN1BQ07699 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.34□□□□□ -1.55
SCN1BQ07699 TXNP4-201ENST00000575018 310 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.34□□□□□ -1.55
SCN1BQ07699 MIMT1-201ENST00000597105 1050 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 AC073046.2-201ENST00000604756 527 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN1BQ07699 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN1BQ07699 AL589743.6-201ENST00000611025 117 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 MIR6070-201ENST00000613967 103 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 MIR6883-201ENST00000614952 78 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 AC007786.3-201ENST00000615154 596 ntBASIC5.34□□□□□ -1.55
SCN1BQ07699 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms