Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COPAP53621 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
COPAP53621 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COPAP53621 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COPAP53621 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COPAP53621 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.37□□□□□ -1.39
COPAP53621 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COPAP53621 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COPAP53621 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COPAP53621 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
COPAP53621 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
COPAP53621 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
COPAP53621 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.37□□□□□ -1.39
COPAP53621 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COPAP53621 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COPAP53621 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COPAP53621 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COPAP53621 AC092642.1-201ENST00000392417 425 ntBASIC6.37□□□□□ -1.39
COPAP53621 RN7SKP121-201ENST00000410842 305 ntBASIC6.37□□□□□ -1.39
COPAP53621 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.37□□□□□ -1.39
COPAP53621 AC019205.1-201ENST00000421830 730 ntBASIC6.37□□□□□ -1.39
COPAP53621 AL121882.1-201ENST00000422893 417 ntBASIC6.37□□□□□ -1.39
COPAP53621 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.37□□□□□ -1.39
COPAP53621 RPS29P14-201ENST00000431518 171 ntBASIC6.37□□□□□ -1.39
COPAP53621 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.37□□□□□ -1.39
COPAP53621 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
COPAP53621 DNAJC19P5-201ENST00000443295 316 ntBASIC6.37□□□□□ -1.39
COPAP53621 SUMO2P1-206ENST00000445436 284 ntBASIC6.37□□□□□ -1.39
COPAP53621 BUD31P2-201ENST00000449374 300 ntBASIC6.37□□□□□ -1.39
COPAP53621 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.37□□□□□ -1.39
COPAP53621 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.37□□□□□ -1.39
COPAP53621 RN7SL326P-201ENST00000477493 296 ntBASIC6.37□□□□□ -1.39
COPAP53621 STRADBP1-201ENST00000478954 1281 ntBASIC6.37□□□□□ -1.39
COPAP53621 RPL34P33-201ENST00000486062 334 ntBASIC6.37□□□□□ -1.39
COPAP53621 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.37□□□□□ -1.39
COPAP53621 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.37□□□□□ -1.39
COPAP53621 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.37□□□□□ -1.39
COPAP53621 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.37□□□□□ -1.39
COPAP53621 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.37□□□□□ -1.39
COPAP53621 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.37□□□□□ -1.39
COPAP53621 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.37□□□□□ -1.39
COPAP53621 AC079905.1-201ENST00000549280 475 ntBASIC6.37□□□□□ -1.39
COPAP53621 AC093510.2-201ENST00000562820 896 ntBASIC6.37□□□□□ -1.39
COPAP53621 AC092332.1-201ENST00000563684 829 ntBASIC6.37□□□□□ -1.39
COPAP53621 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.37□□□□□ -1.39
COPAP53621 AC007346.1-201ENST00000569208 867 ntBASIC6.37□□□□□ -1.39
COPAP53621 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.37□□□□□ -1.39
COPAP53621 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.37□□□□□ -1.39
COPAP53621 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COPAP53621 AP003117.1-201ENST00000602771 554 ntBASIC6.37□□□□□ -1.39
COPAP53621 AC017076.1-201ENST00000607613 578 ntBASIC6.37□□□□□ -1.39
COPAP53621 AC120053.1-201ENST00000607706 736 ntBASIC6.37□□□□□ -1.39
COPAP53621 AL356608.1-201ENST00000610034 820 ntBASIC6.37□□□□□ -1.39
COPAP53621 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COPAP53621 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.37□□□□□ -1.39
COPAP53621 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.37□□□□□ -1.39
COPAP53621 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COPAP53621 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.37□□□□□ -1.39
COPAP53621 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COPAP53621 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COPAP53621 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.36□□□□□ -1.39
COPAP53621 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COPAP53621 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.36□□□□□ -1.39
COPAP53621 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COPAP53621 AC068870.3-201ENST00000625077 2536 ntBASIC6.36□□□□□ -1.39
COPAP53621 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
COPAP53621 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COPAP53621 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COPAP53621 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
COPAP53621 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COPAP53621 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.36□□□□□ -1.39
COPAP53621 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.36□□□□□ -1.39
COPAP53621 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
COPAP53621 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COPAP53621 MIR130B-202ENST00000385018 82 ntBASIC6.36□□□□□ -1.39
COPAP53621 CDY17P-201ENST00000414121 1282 ntBASIC6.36□□□□□ -1.39
COPAP53621 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.36□□□□□ -1.39
COPAP53621 AC066692.1-201ENST00000421721 457 ntBASIC6.36□□□□□ -1.39
COPAP53621 AL354692.1-201ENST00000423044 315 ntBASIC6.36□□□□□ -1.39
COPAP53621 CDY8P-201ENST00000428380 1279 ntBASIC6.36□□□□□ -1.39
COPAP53621 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.36□□□□□ -1.39
COPAP53621 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.36□□□□□ -1.39
COPAP53621 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.36□□□□□ -1.39
COPAP53621 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.36□□□□□ -1.39
COPAP53621 AC007000.2-201ENST00000442564 487 ntBASIC6.36□□□□□ -1.39
COPAP53621 CDY20P-201ENST00000447528 1279 ntBASIC6.36□□□□□ -1.39
COPAP53621 HIGD1AP16-201ENST00000450986 258 ntBASIC6.36□□□□□ -1.39
COPAP53621 AC239798.3-201ENST00000454459 408 ntBASIC6.36□□□□□ -1.39
COPAP53621 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.36□□□□□ -1.39
COPAP53621 SEPT7P3-201ENST00000455017 621 ntBASIC6.36□□□□□ -1.39
COPAP53621 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.36□□□□□ -1.39
COPAP53621 MTND6P32-201ENST00000457611 483 ntBASIC6.36□□□□□ -1.39
COPAP53621 AC023194.2-201ENST00000465398 406 ntBASIC6.36□□□□□ -1.39
COPAP53621 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.36□□□□□ -1.39
COPAP53621 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.36□□□□□ -1.39
COPAP53621 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.36□□□□□ -1.39
COPAP53621 AC091965.3-201ENST00000506236 208 ntBASIC6.36□□□□□ -1.39
COPAP53621 AC010468.3-201ENST00000508225 458 ntBASIC6.36□□□□□ -1.39
COPAP53621 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.36□□□□□ -1.39
COPAP53621 AC026782.2-201ENST00000510845 636 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms