Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.44□□□□□ -1.38
COPB1P53618 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.44□□□□□ -1.38
COPB1P53618 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.44□□□□□ -1.38
COPB1P53618 TXNP4-201ENST00000575018 310 ntBASIC6.44□□□□□ -1.38
COPB1P53618 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.44□□□□□ -1.38
COPB1P53618 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.44□□□□□ -1.38
COPB1P53618 AP003117.1-201ENST00000602771 554 ntBASIC6.44□□□□□ -1.38
COPB1P53618 AC073333.2-201ENST00000603589 769 ntBASIC6.44□□□□□ -1.38
COPB1P53618 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.44□□□□□ -1.38
COPB1P53618 AL135999.3-201ENST00000610501 812 ntBASIC6.44□□□□□ -1.38
COPB1P53618 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COPB1P53618 AC022306.3-201ENST00000619930 550 ntBASIC6.44□□□□□ -1.38
COPB1P53618 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.44□□□□□ -1.38
COPB1P53618 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COPB1P53618 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.44□□□□□ -1.38
COPB1P53618 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
COPB1P53618 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COPB1P53618 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COPB1P53618 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COPB1P53618 AL512283.1-201ENST00000606756 1384 ntBASIC6.44□□□□□ -1.38
COPB1P53618 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPB1P53618 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COPB1P53618 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPB1P53618 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPB1P53618 RNA5SP453-201ENST00000362503 119 ntBASIC6.43□□□□□ -1.38
COPB1P53618 RNU1-65P-201ENST00000363919 148 ntBASIC6.43□□□□□ -1.38
COPB1P53618 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPB1P53618 RNA5SP91-201ENST00000390902 119 ntBASIC6.43□□□□□ -1.38
COPB1P53618 AC087752.1-201ENST00000391360 558 ntBASIC6.43□□□□□ -1.38
COPB1P53618 RPL7P58-201ENST00000402913 758 ntBASIC6.43□□□□□ -1.38
COPB1P53618 RN7SKP86-201ENST00000410454 332 ntBASIC6.43□□□□□ -1.38
COPB1P53618 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.43□□□□□ -1.38
COPB1P53618 RPSAP65-201ENST00000429660 595 ntBASIC6.43□□□□□ -1.38
COPB1P53618 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.43□□□□□ -1.38
COPB1P53618 AK3P5-201ENST00000432033 519 ntBASIC6.43□□□□□ -1.38
COPB1P53618 MTCO1P57-201ENST00000432182 261 ntBASIC6.43□□□□□ -1.38
COPB1P53618 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.43□□□□□ -1.38
COPB1P53618 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.43□□□□□ -1.38
COPB1P53618 PPIAP7-201ENST00000454070 489 ntBASIC6.43□□□□□ -1.38
COPB1P53618 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.43□□□□□ -1.38
COPB1P53618 AC015908.1-201ENST00000478739 476 ntBASIC6.43□□□□□ -1.38
COPB1P53618 PFN1P8-201ENST00000497012 543 ntBASIC6.43□□□□□ -1.38
COPB1P53618 OR7E99P-201ENST00000505750 922 ntBASIC6.43□□□□□ -1.38
COPB1P53618 GUSBP9-201ENST00000510138 584 ntBASIC6.43□□□□□ -1.38
COPB1P53618 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.43□□□□□ -1.38
COPB1P53618 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.43□□□□□ -1.38
COPB1P53618 AP000620.1-201ENST00000527147 504 ntBASIC6.43□□□□□ -1.38
COPB1P53618 AP003049.1-201ENST00000529418 457 ntBASIC6.43□□□□□ -1.38
COPB1P53618 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.43□□□□□ -1.38
COPB1P53618 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.43□□□□□ -1.38
COPB1P53618 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.43□□□□□ -1.38
COPB1P53618 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.43□□□□□ -1.38
COPB1P53618 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.43□□□□□ -1.38
COPB1P53618 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.43□□□□□ -1.38
COPB1P53618 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.43□□□□□ -1.38
COPB1P53618 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.43□□□□□ -1.38
COPB1P53618 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.43□□□□□ -1.38
COPB1P53618 GARSP1-201ENST00000570895 719 ntBASIC6.43□□□□□ -1.38
COPB1P53618 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COPB1P53618 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COPB1P53618 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.43□□□□□ -1.38
COPB1P53618 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.43□□□□□ -1.38
COPB1P53618 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.43□□□□□ -1.38
COPB1P53618 MIR6861-201ENST00000618657 64 ntBASIC6.43□□□□□ -1.38
COPB1P53618 AC096708.4-201ENST00000620563 552 ntBASIC6.43□□□□□ -1.38
COPB1P53618 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.43□□□□□ -1.38
COPB1P53618 AC073488.3-201ENST00000631611 778 ntBASIC6.43□□□□□ -1.38
COPB1P53618 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
COPB1P53618 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COPB1P53618 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
COPB1P53618 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPB1P53618 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
COPB1P53618 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COPB1P53618 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.43□□□□□ -1.38
COPB1P53618 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPB1P53618 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPB1P53618 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COPB1P53618 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPB1P53618 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COPB1P53618 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
COPB1P53618 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
COPB1P53618 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.42□□□□□ -1.38
COPB1P53618 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COPB1P53618 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
COPB1P53618 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.42□□□□□ -1.38
COPB1P53618 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COPB1P53618 MIR1282-201ENST00000408865 101 ntBASIC6.42□□□□□ -1.38
COPB1P53618 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.42□□□□□ -1.38
COPB1P53618 AC092865.3-201ENST00000425390 1026 ntBASIC6.42□□□□□ -1.38
COPB1P53618 BX276092.6-201ENST00000430476 250 ntBASIC6.42□□□□□ -1.38
COPB1P53618 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.42□□□□□ -1.38
COPB1P53618 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COPB1P53618 AC099670.2-201ENST00000435130 321 ntBASIC6.42□□□□□ -1.38
COPB1P53618 MAPRE1P3-201ENST00000435438 796 ntBASIC6.42□□□□□ -1.38
COPB1P53618 AC010240.2-201ENST00000445363 1205 ntBASIC6.42□□□□□ -1.38
COPB1P53618 AL445466.1-201ENST00000448432 357 ntBASIC6.42□□□□□ -1.38
COPB1P53618 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.42□□□□□ -1.38
COPB1P53618 RPS23P9-201ENST00000448848 438 ntBASIC6.42□□□□□ -1.38
COPB1P53618 AL358876.1-201ENST00000453364 1075 ntBASIC6.42□□□□□ -1.38
COPB1P53618 BX276092.8-201ENST00000455722 250 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms