Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 RNU1-150P-201ENST00000362491 162 ntBASIC5.47□□□□□ -1.53
SOX3P41225 RNA5SP122-201ENST00000384457 108 ntBASIC5.47□□□□□ -1.53
SOX3P41225 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SOX3P41225 AC016739.1-201ENST00000405359 345 ntBASIC5.47□□□□□ -1.53
SOX3P41225 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX3P41225 AL035660.1-201ENST00000422041 222 ntBASIC5.47□□□□□ -1.53
SOX3P41225 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX3P41225 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX3P41225 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX3P41225 AC073109.1-201ENST00000445066 978 ntBASIC5.47□□□□□ -1.53
SOX3P41225 AC016724.1-201ENST00000453215 421 ntBASIC5.47□□□□□ -1.53
SOX3P41225 AC011476.1-201ENST00000466725 307 ntBASIC5.47□□□□□ -1.53
SOX3P41225 OR52A4P-203ENST00000498233 1014 ntBASIC5.47□□□□□ -1.53
SOX3P41225 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 AP001960.1-201ENST00000506494 658 ntBASIC5.47□□□□□ -1.53
SOX3P41225 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX3P41225 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX3P41225 RNU4-18P-201ENST00000516751 149 ntBASIC5.47□□□□□ -1.53
SOX3P41225 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX3P41225 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX3P41225 AC006530.1-201ENST00000555980 571 ntBASIC5.47□□□□□ -1.53
SOX3P41225 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX3P41225 AC008521.2-201ENST00000591021 259 ntBASIC5.47□□□□□ -1.53
SOX3P41225 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.47□□□□□ -1.53
SOX3P41225 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.47□□□□□ -1.53
SOX3P41225 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX3P41225 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
SOX3P41225 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SOX3P41225 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SOX3P41225 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX3P41225 AL121839.2-201ENST00000565058 6943 ntBASIC5.46□□□□□ -1.53
SOX3P41225 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.53
SOX3P41225 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX3P41225 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX3P41225 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SOX3P41225 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX3P41225 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX3P41225 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SOX3P41225 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX3P41225 RNA5SP453-201ENST00000362503 119 ntBASIC5.46□□□□□ -1.54
SOX3P41225 TRAV35-201ENST00000390462 330 ntBASIC5.46□□□□□ -1.54
SOX3P41225 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
SOX3P41225 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.46□□□□□ -1.54
SOX3P41225 MYL6P5-201ENST00000412707 459 ntBASIC5.46□□□□□ -1.54
SOX3P41225 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX3P41225 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX3P41225 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX3P41225 AC099677.3-201ENST00000427081 395 ntBASIC5.46□□□□□ -1.54
SOX3P41225 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX3P41225 RSL24D1P2-201ENST00000445584 366 ntBASIC5.46□□□□□ -1.54
SOX3P41225 AP006222.1-205ENST00000450734 457 ntBASIC5.46□□□□□ -1.54
SOX3P41225 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX3P41225 SNRPCP3-201ENST00000474888 476 ntBASIC5.46□□□□□ -1.54
SOX3P41225 RN7SL57P-201ENST00000493687 290 ntBASIC5.46□□□□□ -1.54
SOX3P41225 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.46□□□□□ -1.54
SOX3P41225 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.46□□□□□ -1.54
SOX3P41225 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX3P41225 SNORD46.2-201ENST00000516021 102 ntBASIC5.46□□□□□ -1.54
SOX3P41225 snoU109.5-201ENST00000516231 132 ntBASIC5.46□□□□□ -1.54
SOX3P41225 SNORD116-30-201ENST00000516468 85 ntBASIC5.46□□□□□ -1.54
SOX3P41225 AC026616.1-201ENST00000523157 525 ntBASIC5.46□□□□□ -1.54
SOX3P41225 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX3P41225 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX3P41225 AC025857.1-201ENST00000525252 377 ntBASIC5.46□□□□□ -1.54
SOX3P41225 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX3P41225 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX3P41225 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX3P41225 AL356801.1-201ENST00000559320 294 ntBASIC5.46□□□□□ -1.54
SOX3P41225 ZNF322P1-201ENST00000568013 1209 ntBASIC5.46□□□□□ -1.54
SOX3P41225 FAM27E4-201ENST00000605259 342 ntBASIC5.46□□□□□ -1.54
SOX3P41225 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.46□□□□□ -1.54
SOX3P41225 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX3P41225 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX3P41225 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX3P41225 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX3P41225 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX3P41225 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX3P41225 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX3P41225 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX3P41225 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX3P41225 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX3P41225 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SOX3P41225 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SOX3P41225 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SOX3P41225 NEPNP-201ENST00000404786 1371 ntBASIC5.45□□□□□ -1.54
SOX3P41225 AC239868.2-201ENST00000564237 4527 ntBASIC5.45□□□□□ -1.54
SOX3P41225 AC114774.1-201ENST00000507410 1770 ntBASIC5.45□□□□□ -1.54
SOX3P41225 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX3P41225 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SOX3P41225 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX3P41225 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SOX3P41225 RNA5SP211-201ENST00000365516 117 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms