Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGA1P17096 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGA1P17096 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HMGA1P17096 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGA1P17096 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HMGA1P17096 U3.7-201ENST00000363668 216 ntBASIC5.83□□□□□ -1.48
HMGA1P17096 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGA1P17096 AP000534.2-201ENST00000412729 568 ntBASIC5.83□□□□□ -1.48
HMGA1P17096 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGA1P17096 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGA1P17096 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.83□□□□□ -1.48
HMGA1P17096 RPL7L1P9-201ENST00000431298 745 ntBASIC5.83□□□□□ -1.48
HMGA1P17096 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGA1P17096 AL627308.1-201ENST00000435693 821 ntBASIC5.83□□□□□ -1.48
HMGA1P17096 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGA1P17096 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGA1P17096 OR2AO1P-201ENST00000476497 403 ntBASIC5.83□□□□□ -1.48
HMGA1P17096 RPS4XP1-201ENST00000482189 787 ntBASIC5.83□□□□□ -1.48
HMGA1P17096 IGLV2-28-201ENST00000520681 304 ntBASIC5.83□□□□□ -1.48
HMGA1P17096 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGA1P17096 AC078878.1-201ENST00000539832 958 ntBASIC5.83□□□□□ -1.48
HMGA1P17096 AC126177.5-201ENST00000549599 178 ntBASIC5.83□□□□□ -1.48
HMGA1P17096 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGA1P17096 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGA1P17096 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGA1P17096 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGA1P17096 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGA1P17096 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGA1P17096 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGA1P17096 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGA1P17096 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGA1P17096 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HMGA1P17096 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HMGA1P17096 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGA1P17096 AL592429.1-201ENST00000403909 1473 ntBASIC5.83□□□□□ -1.48
HMGA1P17096 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGA1P17096 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGA1P17096 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGA1P17096 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGA1P17096 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HMGA1P17096 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
HMGA1P17096 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGA1P17096 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGA1P17096 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGA1P17096 RNA5SP335-201ENST00000363817 110 ntBASIC5.82□□□□□ -1.48
HMGA1P17096 GNG5P2-201ENST00000372054 207 ntBASIC5.82□□□□□ -1.48
HMGA1P17096 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGA1P17096 MIR551A-201ENST00000385042 96 ntBASIC5.82□□□□□ -1.48
HMGA1P17096 MIR105-2-201ENST00000385083 81 ntBASIC5.82□□□□□ -1.48
HMGA1P17096 RNU1-77P-201ENST00000390868 162 ntBASIC5.82□□□□□ -1.48
HMGA1P17096 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
HMGA1P17096 AL009179.1-201ENST00000406085 265 ntBASIC5.82□□□□□ -1.48
HMGA1P17096 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGA1P17096 AC096921.1-201ENST00000411661 375 ntBASIC5.82□□□□□ -1.48
HMGA1P17096 AL390774.1-201ENST00000411924 246 ntBASIC5.82□□□□□ -1.48
HMGA1P17096 AC007161.1-204ENST00000423039 460 ntBASIC5.82□□□□□ -1.48
HMGA1P17096 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGA1P17096 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.82□□□□□ -1.48
HMGA1P17096 RNA5SP92-201ENST00000516437 110 ntBASIC5.82□□□□□ -1.48
HMGA1P17096 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGA1P17096 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGA1P17096 MIR4443-201ENST00000585052 53 ntBASIC5.82□□□□□ -1.48
HMGA1P17096 AL512329.2-201ENST00000607350 548 ntBASIC5.82□□□□□ -1.48
HMGA1P17096 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGA1P17096 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGA1P17096 AC018445.2-201ENST00000622987 260 ntBASIC5.82□□□□□ -1.48
HMGA1P17096 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HMGA1P17096 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGA1P17096 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGA1P17096 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGA1P17096 AL162456.1-201ENST00000634535 2006 ntBASIC5.82□□□□□ -1.48
HMGA1P17096 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGA1P17096 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
HMGA1P17096 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGA1P17096 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGA1P17096 AC011933.2-201ENST00000578539 2790 ntBASIC5.82□□□□□ -1.48
HMGA1P17096 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HMGA1P17096 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.81□□□□□ -1.48
HMGA1P17096 C4BPAP1-201ENST00000415474 1893 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGA1P17096 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGA1P17096 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGA1P17096 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGA1P17096 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGA1P17096 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HMGA1P17096 AC109780.1-201ENST00000451768 1344 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGA1P17096 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGA1P17096 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGA1P17096 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGA1P17096 AC137056.2-201ENST00000624055 1958 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 RNA5SP326-201ENST00000363209 110 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 RNU1-136P-201ENST00000384181 164 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 AC005042.1-201ENST00000393397 800 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 RNF10P1-201ENST00000418589 369 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 RNGTTP1-201ENST00000420965 728 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 CYCSP6-201ENST00000434498 302 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 AC092106.1-201ENST00000444291 373 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 AC008953.1-201ENST00000497334 318 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms