Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.13□□□□□ -1.43
PDGFRAP16234 MFSD8-219ENST00000641228 2559 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PDGFRAP16234 AC083837.1-201ENST00000565297 2994 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFRAP16234 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFRAP16234 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFRAP16234 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFRAP16234 AC023490.2-201ENST00000359859 470 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFRAP16234 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PDGFRAP16234 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PDGFRAP16234 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFRAP16234 CBX1P3-201ENST00000413296 527 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 SLC20A1P1-201ENST00000413906 956 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.12□□□□□ -1.43
PDGFRAP16234 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.12□□□□□ -1.43
PDGFRAP16234 BX323845.3-201ENST00000428215 527 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFRAP16234 RPS29P14-201ENST00000431518 171 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.12□□□□□ -1.43
PDGFRAP16234 PCBP2P1-201ENST00000437262 977 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.12□□□□□ -1.43
PDGFRAP16234 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFRAP16234 RSU1P1-201ENST00000453416 441 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.12□□□□□ -1.43
PDGFRAP16234 AC084754.1-201ENST00000463466 464 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.12□□□□□ -1.43
PDGFRAP16234 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFRAP16234 RN7SL57P-201ENST00000493687 290 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.12□□□□□ -1.43
PDGFRAP16234 ASNSP4-201ENST00000511103 447 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 RNA5SP271-201ENST00000516700 88 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.12□□□□□ -1.43
PDGFRAP16234 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFRAP16234 AC008676.3-201ENST00000521237 435 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 AC130364.2-201ENST00000528639 604 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 AC025423.2-201ENST00000537570 439 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 AL121594.2-201ENST00000541658 472 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PDGFRAP16234 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.12□□□□□ -1.43
PDGFRAP16234 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PDGFRAP16234 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFRAP16234 MTCO1P22-201ENST00000604619 1360 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 SNORA35B-201ENST00000607417 129 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.12□□□□□ -1.43
PDGFRAP16234 AL352984.2-202ENST00000613699 155 ntBASIC6.12□□□□□ -1.43
PDGFRAP16234 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFRAP16234 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFRAP16234 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFRAP16234 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
PDGFRAP16234 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFRAP16234 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PDGFRAP16234 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFRAP16234 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFRAP16234 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFRAP16234 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFRAP16234 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFRAP16234 FBXL21-201ENST00000297158 1305 ntBASIC6.11□□□□□ -1.43
PDGFRAP16234 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PDGFRAP16234 RN7SKP78-201ENST00000364711 318 ntBASIC6.11□□□□□ -1.43
PDGFRAP16234 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFRAP16234 CRIP1P1-201ENST00000427567 185 ntBASIC6.11□□□□□ -1.43
PDGFRAP16234 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFRAP16234 AL389925.1-201ENST00000432257 728 ntBASIC6.11□□□□□ -1.43
PDGFRAP16234 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFRAP16234 DNAJC19P5-201ENST00000443295 316 ntBASIC6.11□□□□□ -1.43
PDGFRAP16234 REG1CP-206ENST00000447469 496 ntBASIC6.11□□□□□ -1.43
PDGFRAP16234 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFRAP16234 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFRAP16234 FRG2FP-204ENST00000453982 852 ntBASIC6.11□□□□□ -1.43
PDGFRAP16234 AC004129.2-201ENST00000457229 287 ntBASIC6.11□□□□□ -1.43
PDGFRAP16234 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFRAP16234 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFRAP16234 IGKV2-4-201ENST00000523070 340 ntBASIC6.11□□□□□ -1.43
PDGFRAP16234 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFRAP16234 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFRAP16234 AL356801.1-201ENST00000559320 294 ntBASIC6.11□□□□□ -1.43
PDGFRAP16234 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFRAP16234 AL163952.1-202ENST00000569625 600 ntBASIC6.11□□□□□ -1.43
PDGFRAP16234 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFRAP16234 AC100767.2-201ENST00000604840 693 ntBASIC6.11□□□□□ -1.43
PDGFRAP16234 AL133481.2-203ENST00000607558 139 ntBASIC6.11□□□□□ -1.43
PDGFRAP16234 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.11□□□□□ -1.43
PDGFRAP16234 Z95114.1-201ENST00000624264 14574 ntBASIC6.11□□□□□ -1.43
PDGFRAP16234 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFRAP16234 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFRAP16234 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFRAP16234 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFRAP16234 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFRAP16234 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
PDGFRAP16234 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFRAP16234 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFRAP16234 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFRAP16234 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFRAP16234 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFRAP16234 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFRAP16234 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFRAP16234 MFSD8-239ENST00000641590 2479 ntBASIC6.1□□□□□ -1.43
PDGFRAP16234 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms