Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC008897.1-201ENST00000494006 347 ntBASIC9.43□□□□□ -0.9
CFTRP13569 AC087283.1-201ENST00000604029 1074 ntBASIC9.43□□□□□ -0.9
CFTRP13569 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC9.43□□□□□ -0.9
CFTRP13569 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC9.43□□□□□ -0.9
CFTRP13569 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CFTRP13569 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CFTRP13569 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CFTRP13569 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC9.43□□□□□ -0.9
CFTRP13569 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
CFTRP13569 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC9.43□□□□□ -0.9
CFTRP13569 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CFTRP13569 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CFTRP13569 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CFTRP13569 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC9.42□□□□□ -0.9
CFTRP13569 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
CFTRP13569 RNU1-32P-201ENST00000363937 159 ntBASIC9.42□□□□□ -0.9
CFTRP13569 COX6B1P1-201ENST00000415962 213 ntBASIC9.42□□□□□ -0.9
CFTRP13569 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC9.42□□□□□ -0.9
CFTRP13569 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CFTRP13569 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC9.42□□□□□ -0.9
CFTRP13569 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CFTRP13569 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
CFTRP13569 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC9.42□□□□□ -0.9
CFTRP13569 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CFTRP13569 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CFTRP13569 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CFTRP13569 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
CFTRP13569 MIPEPP2-201ENST00000422560 1819 ntBASIC9.41□□□□□ -0.9
CFTRP13569 RN7SKP95-201ENST00000362860 303 ntBASIC9.41□□□□□ -0.9
CFTRP13569 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC9.41□□□□□ -0.9
CFTRP13569 AL451063.1-201ENST00000450164 1133 ntBASIC9.41□□□□□ -0.9
CFTRP13569 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC9.41□□□□□ -0.9
CFTRP13569 AC009117.1-201ENST00000563948 554 ntBASIC9.41□□□□□ -0.9
CFTRP13569 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC9.41□□□□□ -0.9
CFTRP13569 AC068790.7-201ENST00000602347 528 ntBASIC9.41□□□□□ -0.9
CFTRP13569 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC9.41□□□□□ -0.9
CFTRP13569 AC074101.1-201ENST00000637861 241 ntBASIC9.41□□□□□ -0.9
CFTRP13569 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
CFTRP13569 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CFTRP13569 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
CFTRP13569 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
CFTRP13569 AC232271.1-201ENST00000602455 2715 ntBASIC9.41□□□□□ -0.9
CFTRP13569 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CFTRP13569 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
CFTRP13569 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CFTRP13569 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
CFTRP13569 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC9.41□□□□□ -0.9
CFTRP13569 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC9.41□□□□□ -0.9
CFTRP13569 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CFTRP13569 RN7SKP149-201ENST00000363008 344 ntBASIC9.4□□□□□ -0.9
CFTRP13569 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC9.4□□□□□ -0.9
CFTRP13569 AC116036.1-201ENST00000412199 367 ntBASIC9.4□□□□□ -0.9
CFTRP13569 DDX39BP1-205ENST00000422507 192 ntBASIC9.4□□□□□ -0.9
CFTRP13569 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC9.4□□□□□ -0.9
CFTRP13569 NANOGP9-201ENST00000439890 892 ntBASIC9.4□□□□□ -0.9
CFTRP13569 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC9.4□□□□□ -0.9
CFTRP13569 OSTCP1-201ENST00000455507 450 ntBASIC9.4□□□□□ -0.9
CFTRP13569 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CFTRP13569 C1GALT1P3-201ENST00000522049 819 ntBASIC9.4□□□□□ -0.9
CFTRP13569 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC9.4□□□□□ -0.9
CFTRP13569 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CFTRP13569 AC099494.2-201ENST00000623371 978 ntBASIC9.4□□□□□ -0.9
CFTRP13569 AC091905.4-201ENST00000623432 202 ntBASIC9.4□□□□□ -0.9
CFTRP13569 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
CFTRP13569 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC9.4□□□□□ -0.9
CFTRP13569 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CFTRP13569 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CFTRP13569 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC9.4□□□□□ -0.9
CFTRP13569 AL008638.3-201ENST00000623027 5182 ntBASIC9.4□□□□□ -0.9
CFTRP13569 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CFTRP13569 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CFTRP13569 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CFTRP13569 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CFTRP13569 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC9.4□□□□□ -0.9
CFTRP13569 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
CFTRP13569 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CFTRP13569 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
CFTRP13569 MT-RNR2-201ENST00000387347 1559 ntBASIC9.4□□□□□ -0.91
CFTRP13569 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC9.4□□□□□ -0.91
CFTRP13569 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
CFTRP13569 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
CFTRP13569 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
CFTRP13569 RPS4XP9-201ENST00000405151 780 ntBASIC9.4□□□□□ -0.91
CFTRP13569 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC9.4□□□□□ -0.91
CFTRP13569 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC9.4□□□□□ -0.91
CFTRP13569 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC9.4□□□□□ -0.91
CFTRP13569 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC9.4□□□□□ -0.91
CFTRP13569 AC009127.1-201ENST00000467090 155 ntBASIC9.4□□□□□ -0.91
CFTRP13569 RPL7P16-201ENST00000479738 738 ntBASIC9.4□□□□□ -0.91
CFTRP13569 RPS4XP20-201ENST00000505751 772 ntBASIC9.4□□□□□ -0.91
CFTRP13569 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC9.4□□□□□ -0.91
CFTRP13569 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC9.4□□□□□ -0.91
CFTRP13569 MIR4737-201ENST00000583979 81 ntBASIC9.4□□□□□ -0.91
CFTRP13569 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC9.4□□□□□ -0.91
CFTRP13569 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CFTRP13569 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
CFTRP13569 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CFTRP13569 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CFTRP13569 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFTRP13569 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms