Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RN7SKP185-201ENST00000362813 326 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 RN7SKP145-201ENST00000363291 303 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 RNU1-136P-201ENST00000384181 164 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UBCP0CG48 AC016739.1-201ENST00000405359 345 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 AL121878.1-201ENST00000418638 859 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 AC234781.4-201ENST00000419384 244 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.08□□□□□ -1.6
UBCP0CG48 AC019205.1-201ENST00000421830 730 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.08□□□□□ -1.6
UBCP0CG48 OR10T1P-201ENST00000424327 947 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 RPS12P17-201ENST00000438591 377 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 AC010240.2-201ENST00000445363 1205 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 RPS27P20-201ENST00000492051 246 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 RPSAP51-201ENST00000497462 645 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.08□□□□□ -1.6
UBCP0CG48 RNA5SP230-201ENST00000517039 122 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.08□□□□□ -1.6
UBCP0CG48 AC008126.1-201ENST00000549019 480 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.08□□□□□ -1.6
UBCP0CG48 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.08□□□□□ -1.6
UBCP0CG48 AL078601.3-201ENST00000573303 535 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 RN7SL230P-201ENST00000580835 303 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.08□□□□□ -1.6
UBCP0CG48 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.08□□□□□ -1.6
UBCP0CG48 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.08□□□□□ -1.6
UBCP0CG48 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.08□□□□□ -1.6
UBCP0CG48 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.08□□□□□ -1.6
UBCP0CG48 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.08□□□□□ -1.6
UBCP0CG48 AC073488.3-201ENST00000631611 778 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 AC099654.6-201ENST00000636487 512 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.08□□□□□ -1.6
UBCP0CG48 AC112255.1-201ENST00000624070 2493 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 MFSD8-239ENST00000641590 2479 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.08□□□□□ -1.6
UBCP0CG48 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBCP0CG48 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UBCP0CG48 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UBCP0CG48 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.07□□□□□ -1.6
UBCP0CG48 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
UBCP0CG48 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UBCP0CG48 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.07□□□□□ -1.6
UBCP0CG48 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.07□□□□□ -1.6
UBCP0CG48 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UBCP0CG48 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.07□□□□□ -1.6
UBCP0CG48 AC093849.1-201ENST00000563631 2209 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
UBCP0CG48 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
UBCP0CG48 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
UBCP0CG48 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
UBCP0CG48 RNA5SP110-201ENST00000362638 115 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UBCP0CG48 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.07□□□□□ -1.6
UBCP0CG48 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
UBCP0CG48 RNA5SP431-201ENST00000410312 120 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.07□□□□□ -1.6
UBCP0CG48 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.07□□□□□ -1.6
UBCP0CG48 KIF4CP-201ENST00000422742 1279 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 DEFA9P-201ENST00000433042 285 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 LINC00328-2P-201ENST00000436585 219 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.07□□□□□ -1.6
UBCP0CG48 AL356121.1-201ENST00000442911 156 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 AC007383.1-201ENST00000445875 636 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.07□□□□□ -1.6
UBCP0CG48 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.07□□□□□ -1.6
UBCP0CG48 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.07□□□□□ -1.6
UBCP0CG48 RN7SL254P-201ENST00000460609 284 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.07□□□□□ -1.6
UBCP0CG48 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.07□□□□□ -1.6
UBCP0CG48 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.07□□□□□ -1.6
UBCP0CG48 HMGN1P17-201ENST00000513734 295 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 RFPL4AP3-201ENST00000515267 345 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.07□□□□□ -1.6
UBCP0CG48 RNU6-943P-201ENST00000516960 98 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.07□□□□□ -1.6
UBCP0CG48 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UBCP0CG48 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.07□□□□□ -1.6
UBCP0CG48 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.07□□□□□ -1.6
UBCP0CG48 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.07□□□□□ -1.6
UBCP0CG48 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.07□□□□□ -1.6
UBCP0CG48 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.07□□□□□ -1.6
UBCP0CG48 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.07□□□□□ -1.6
UBCP0CG48 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.07□□□□□ -1.6
UBCP0CG48 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.07□□□□□ -1.6
UBCP0CG48 AC006363.1-201ENST00000603806 463 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.07□□□□□ -1.6
UBCP0CG48 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.07□□□□□ -1.6
UBCP0CG48 FAM72A-208ENST00000607379 1139 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.07□□□□□ -1.6
UBCP0CG48 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.07□□□□□ -1.6
UBCP0CG48 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.07□□□□□ -1.6
UBCP0CG48 AL357140.4-201ENST00000636827 412 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 AC007603.3-201ENST00000636915 979 ntBASIC5.07□□□□□ -1.6
UBCP0CG48 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.07□□□□□ -1.6
UBCP0CG48 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
UBCP0CG48 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UBCP0CG48 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.07□□□□□ -1.6
UBCP0CG48 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.07□□□□□ -1.6
UBCP0CG48 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms