Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC109583.2-201ENST00000617367 129 ntBASIC7.34□□□□□ -1.23
COL3A1P02461 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.34□□□□□ -1.23
COL3A1P02461 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.34□□□□□ -1.23
COL3A1P02461 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
COL3A1P02461 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL3A1P02461 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.34□□□□□ -1.23
COL3A1P02461 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
COL3A1P02461 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.24
COL3A1P02461 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
COL3A1P02461 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
COL3A1P02461 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.33□□□□□ -1.24
COL3A1P02461 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL3A1P02461 ZNF658B-201ENST00000602828 3408 ntBASIC7.33□□□□□ -1.24
COL3A1P02461 AL355488.2-201ENST00000609909 2850 ntBASIC7.33□□□□□ -1.24
COL3A1P02461 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL3A1P02461 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL3A1P02461 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC7.33□□□□□ -1.24
COL3A1P02461 RNU1-146P-201ENST00000364015 165 ntBASIC7.33□□□□□ -1.24
COL3A1P02461 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC7.33□□□□□ -1.24
COL3A1P02461 RPL11P3-201ENST00000395256 523 ntBASIC7.33□□□□□ -1.24
COL3A1P02461 MIR1178-201ENST00000408396 91 ntBASIC7.33□□□□□ -1.24
COL3A1P02461 CYCSP6-201ENST00000434498 302 ntBASIC7.33□□□□□ -1.24
COL3A1P02461 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC7.33□□□□□ -1.24
COL3A1P02461 AC245047.2-201ENST00000441060 530 ntBASIC7.33□□□□□ -1.24
COL3A1P02461 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC7.33□□□□□ -1.24
COL3A1P02461 COX6B1P2-201ENST00000489624 230 ntBASIC7.33□□□□□ -1.24
COL3A1P02461 AC008638.1-201ENST00000506035 866 ntBASIC7.33□□□□□ -1.24
COL3A1P02461 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC7.33□□□□□ -1.24
COL3A1P02461 AC009712.1-201ENST00000564938 316 ntBASIC7.33□□□□□ -1.24
COL3A1P02461 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.33□□□□□ -1.24
COL3A1P02461 AC010245.2-201ENST00000606908 1167 ntBASIC7.33□□□□□ -1.24
COL3A1P02461 AC087821.1-201ENST00000623639 567 ntBASIC7.33□□□□□ -1.24
COL3A1P02461 AC004808.2-201ENST00000627965 773 ntBASIC7.33□□□□□ -1.24
COL3A1P02461 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL3A1P02461 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.33□□□□□ -1.24
COL3A1P02461 MT-RNR2-201ENST00000387347 1559 ntBASIC7.33□□□□□ -1.24
COL3A1P02461 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
COL3A1P02461 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL3A1P02461 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
COL3A1P02461 NBPF8-201ENST00000583271 5330 ntBASIC7.32□□□□□ -1.24
COL3A1P02461 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL3A1P02461 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL3A1P02461 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.32□□□□□ -1.24
COL3A1P02461 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL3A1P02461 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL3A1P02461 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.32□□□□□ -1.24
COL3A1P02461 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.32□□□□□ -1.24
COL3A1P02461 AC108075.1-201ENST00000424692 529 ntBASIC7.32□□□□□ -1.24
COL3A1P02461 AL121578.1-201ENST00000428051 892 ntBASIC7.32□□□□□ -1.24
COL3A1P02461 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.32□□□□□ -1.24
COL3A1P02461 CNOT7P2-201ENST00000441051 832 ntBASIC7.32□□□□□ -1.24
COL3A1P02461 LINC02210-201ENST00000444561 288 ntBASIC7.32□□□□□ -1.24
COL3A1P02461 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
COL3A1P02461 SNORA26.10-201ENST00000516427 141 ntBASIC7.32□□□□□ -1.24
COL3A1P02461 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC7.32□□□□□ -1.24
COL3A1P02461 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
COL3A1P02461 AC087272.1-201ENST00000523624 533 ntBASIC7.32□□□□□ -1.24
COL3A1P02461 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.32□□□□□ -1.24
COL3A1P02461 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.32□□□□□ -1.24
COL3A1P02461 FKBP1AP1-201ENST00000594588 318 ntBASIC7.32□□□□□ -1.24
COL3A1P02461 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.32□□□□□ -1.24
COL3A1P02461 MIR6719-201ENST00000622428 87 ntBASIC7.32□□□□□ -1.24
COL3A1P02461 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
COL3A1P02461 AC009452.1-201ENST00000640823 606 ntBASIC7.32□□□□□ -1.24
COL3A1P02461 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL3A1P02461 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL3A1P02461 AC034229.2-201ENST00000566945 2508 ntBASIC7.32□□□□□ -1.24
COL3A1P02461 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL3A1P02461 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.32□□□□□ -1.24
COL3A1P02461 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL3A1P02461 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL3A1P02461 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.32□□□□□ -1.24
COL3A1P02461 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.32□□□□□ -1.24
COL3A1P02461 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL3A1P02461 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL3A1P02461 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.31□□□□□ -1.24
COL3A1P02461 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
COL3A1P02461 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
COL3A1P02461 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
COL3A1P02461 RNU6ATAC18P-201ENST00000408413 101 ntBASIC7.31□□□□□ -1.24
COL3A1P02461 METTL15P3-201ENST00000415522 1221 ntBASIC7.31□□□□□ -1.24
COL3A1P02461 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL3A1P02461 GTF3AP1-201ENST00000416942 1004 ntBASIC7.31□□□□□ -1.24
COL3A1P02461 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.31□□□□□ -1.24
COL3A1P02461 NANOGP4-201ENST00000427230 913 ntBASIC7.31□□□□□ -1.24
COL3A1P02461 DSTNP5-201ENST00000427921 523 ntBASIC7.31□□□□□ -1.24
COL3A1P02461 ZNF736P11Y-201ENST00000442535 1213 ntBASIC7.31□□□□□ -1.24
COL3A1P02461 ZNF736P12Y-201ENST00000443152 1243 ntBASIC7.31□□□□□ -1.24
COL3A1P02461 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.31□□□□□ -1.24
COL3A1P02461 AC073072.2-201ENST00000447425 348 ntBASIC7.31□□□□□ -1.24
COL3A1P02461 ZNF736P4Y-201ENST00000454995 1243 ntBASIC7.31□□□□□ -1.24
COL3A1P02461 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.31□□□□□ -1.24
COL3A1P02461 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC7.31□□□□□ -1.24
COL3A1P02461 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.31□□□□□ -1.24
COL3A1P02461 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.31□□□□□ -1.24
COL3A1P02461 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC7.31□□□□□ -1.24
COL3A1P02461 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.31□□□□□ -1.24
COL3A1P02461 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL3A1P02461 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL3A1P02461 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms