Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.53□□□□□ -1.52
CLPTM1O96005 AP003033.2-201ENST00000528901 805 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.53□□□□□ -1.52
CLPTM1O96005 LSM3P2-201ENST00000551246 273 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.53□□□□□ -1.52
CLPTM1O96005 AC023968.1-201ENST00000560719 475 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.53□□□□□ -1.52
CLPTM1O96005 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.53□□□□□ -1.52
CLPTM1O96005 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.53□□□□□ -1.52
CLPTM1O96005 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.53□□□□□ -1.52
CLPTM1O96005 RN7SL475P-201ENST00000583379 298 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 AC073046.2-201ENST00000604756 527 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.53□□□□□ -1.52
CLPTM1O96005 AC005828.7-201ENST00000607331 556 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.53□□□□□ -1.52
CLPTM1O96005 AL451049.1-201ENST00000608672 497 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.53□□□□□ -1.52
CLPTM1O96005 AC103798.2-201ENST00000624292 632 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.53□□□□□ -1.52
CLPTM1O96005 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CLPTM1O96005 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLPTM1O96005 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLPTM1O96005 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLPTM1O96005 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLPTM1O96005 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLPTM1O96005 AL353743.3-201ENST00000442109 1468 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
CLPTM1O96005 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.52□□□□□ -1.53
CLPTM1O96005 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.52□□□□□ -1.53
CLPTM1O96005 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CLPTM1O96005 RPL11P4-201ENST00000332269 436 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 RN7SKP250-201ENST00000363924 321 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 SNORA43.1-201ENST00000364863 140 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CLPTM1O96005 EI24P3-201ENST00000399046 1062 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 PRELID1P1-201ENST00000403549 660 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 RNU2-22P-201ENST00000411266 212 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 AC019070.1-201ENST00000415008 1024 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.52□□□□□ -1.53
CLPTM1O96005 THEM7P-201ENST00000419556 672 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.52□□□□□ -1.53
CLPTM1O96005 AC113412.1-201ENST00000425840 504 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 AC009784.1-201ENST00000426484 460 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.52□□□□□ -1.53
CLPTM1O96005 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.52□□□□□ -1.53
CLPTM1O96005 TCEA1P3-201ENST00000443005 880 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CLPTM1O96005 MORF4-201ENST00000447135 971 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 AC097359.1-201ENST00000447946 463 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 ACA64.4-201ENST00000459070 127 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.52□□□□□ -1.53
CLPTM1O96005 NPIPB14P-203ENST00000532298 987 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.52□□□□□ -1.53
CLPTM1O96005 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.52□□□□□ -1.53
CLPTM1O96005 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.52□□□□□ -1.53
CLPTM1O96005 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.52□□□□□ -1.53
CLPTM1O96005 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.52□□□□□ -1.53
CLPTM1O96005 TPRX1P1-201ENST00000557620 319 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.52□□□□□ -1.53
CLPTM1O96005 MT1CP-201ENST00000567054 174 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.52□□□□□ -1.53
CLPTM1O96005 RNU4ATAC-201ENST00000580972 127 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CLPTM1O96005 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CLPTM1O96005 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.52□□□□□ -1.53
CLPTM1O96005 AC009303.3-201ENST00000591103 736 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.52□□□□□ -1.53
CLPTM1O96005 DYNLL1P1-201ENST00000595442 269 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 MIR6780B-201ENST00000610307 79 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 uc_338.29-201ENST00000615099 168 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 AL118508.4-201ENST00000624142 1176 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.52□□□□□ -1.53
CLPTM1O96005 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CLPTM1O96005 THAP12P9-201ENST00000503971 2360 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 AC130304.1-201ENST00000622942 2385 ntBASIC5.52□□□□□ -1.53
CLPTM1O96005 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.52□□□□□ -1.53
CLPTM1O96005 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLPTM1O96005 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLPTM1O96005 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLPTM1O96005 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.52□□□□□ -1.53
CLPTM1O96005 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLPTM1O96005 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.51□□□□□ -1.53
CLPTM1O96005 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
CLPTM1O96005 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.51□□□□□ -1.53
CLPTM1O96005 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CLPTM1O96005 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLPTM1O96005 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
CLPTM1O96005 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLPTM1O96005 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLPTM1O96005 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CLPTM1O96005 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.51□□□□□ -1.53
CLPTM1O96005 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CLPTM1O96005 PSMA6P1-201ENST00000400275 741 ntBASIC5.51□□□□□ -1.53
CLPTM1O96005 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.51□□□□□ -1.53
CLPTM1O96005 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.51□□□□□ -1.53
CLPTM1O96005 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.51□□□□□ -1.53
CLPTM1O96005 RPSAP65-201ENST00000429660 595 ntBASIC5.51□□□□□ -1.53
CLPTM1O96005 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.51□□□□□ -1.53
CLPTM1O96005 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.51□□□□□ -1.53
CLPTM1O96005 AC017099.1-201ENST00000448261 1028 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms