Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.4□□□□□ -1.54
ZIC3O60481 KCTD9P1-201ENST00000430462 1167 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.4□□□□□ -1.54
ZIC3O60481 AL512605.1-202ENST00000441919 381 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 RPS7P3-201ENST00000443360 580 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 AL359955.2-201ENST00000445380 353 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ZIC3O60481 AL162739.1-201ENST00000450606 307 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.4□□□□□ -1.54
ZIC3O60481 AP002345.1-201ENST00000456493 928 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 LDHBP2-201ENST00000456969 1005 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.4□□□□□ -1.54
ZIC3O60481 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.4□□□□□ -1.54
ZIC3O60481 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
ZIC3O60481 AC008629.2-201ENST00000503783 483 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 AC006499.4-201ENST00000510947 694 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.4□□□□□ -1.54
ZIC3O60481 SETP21-201ENST00000514799 892 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 RN7SKP157-201ENST00000516174 282 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 AC008429.4-201ENST00000521201 182 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 WBP1LP3-201ENST00000523033 208 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.4□□□□□ -1.54
ZIC3O60481 OR4V1P-201ENST00000525394 1140 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.4□□□□□ -1.54
ZIC3O60481 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.4□□□□□ -1.54
ZIC3O60481 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.4□□□□□ -1.54
ZIC3O60481 AC079148.1-201ENST00000565944 819 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 MIR4776-2-201ENST00000580204 80 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 BNIP3P31-201ENST00000604515 566 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 AC135178.6-201ENST00000605314 398 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 uc_338.26-201ENST00000612659 160 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 AL021918.2-201ENST00000613415 194 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 AL096712.1-201ENST00000614561 159 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 MIR6861-201ENST00000618657 64 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 AL163051.2-201ENST00000618976 735 ntBASIC5.4□□□□□ -1.54
ZIC3O60481 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.4□□□□□ -1.54
ZIC3O60481 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
ZIC3O60481 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
ZIC3O60481 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ZIC3O60481 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.4□□□□□ -1.55
ZIC3O60481 AC137056.2-201ENST00000624055 1958 ntBASIC5.4□□□□□ -1.55
ZIC3O60481 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.4□□□□□ -1.55
ZIC3O60481 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
ZIC3O60481 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZIC3O60481 CR382285.2-201ENST00000624662 1495 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ZIC3O60481 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.39□□□□□ -1.55
ZIC3O60481 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ZIC3O60481 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZIC3O60481 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZIC3O60481 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZIC3O60481 AC027088.4-201ENST00000611559 1947 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZIC3O60481 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.39□□□□□ -1.55
ZIC3O60481 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
ZIC3O60481 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZIC3O60481 SNORD115-48-201ENST00000364764 76 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ZIC3O60481 ST13P16-201ENST00000401760 781 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 SLC20A1P1-201ENST00000413906 956 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.39□□□□□ -1.55
ZIC3O60481 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.39□□□□□ -1.55
ZIC3O60481 AL354692.1-201ENST00000423044 315 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.39□□□□□ -1.55
ZIC3O60481 AL445928.1-201ENST00000435545 222 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.39□□□□□ -1.55
ZIC3O60481 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.39□□□□□ -1.55
ZIC3O60481 CUBNP2-201ENST00000443534 1139 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 SUMO2P1-206ENST00000445436 284 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 RAB28P3-201ENST00000448325 597 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.39□□□□□ -1.55
ZIC3O60481 AC144530.1-201ENST00000452862 555 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 HLA-DPA3-207ENST00000454398 229 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.39□□□□□ -1.55
ZIC3O60481 AC104164.1-201ENST00000460282 590 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 AC094085.1-201ENST00000468914 584 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 AL122020.1-201ENST00000472287 459 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.39□□□□□ -1.55
ZIC3O60481 AK4P6-201ENST00000505168 528 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 RNU6-319P-201ENST00000516025 108 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 RNA5SP271-201ENST00000516700 88 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.39□□□□□ -1.55
ZIC3O60481 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.39□□□□□ -1.55
ZIC3O60481 PCNAP4-201ENST00000532690 730 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 DPPA3P2-202ENST00000557188 1219 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 AL356801.1-201ENST00000559320 294 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.39□□□□□ -1.55
ZIC3O60481 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.39□□□□□ -1.55
ZIC3O60481 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.39□□□□□ -1.55
ZIC3O60481 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.39□□□□□ -1.55
ZIC3O60481 AC015911.5-201ENST00000587076 451 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 AC090330.1-201ENST00000588646 764 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 MIR132-201ENST00000591554 101 ntBASIC5.39□□□□□ -1.55
ZIC3O60481 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.39□□□□□ -1.55
ZIC3O60481 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.39□□□□□ -1.55
ZIC3O60481 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ZIC3O60481 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
ZIC3O60481 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms