Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 RPL21P50-201ENST00000417698 477 ntBASIC5.47□□□□□ -1.53
SSX4O60224 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX4O60224 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SSX4O60224 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 AC017019.1-201ENST00000426129 261 ntBASIC5.47□□□□□ -1.53
SSX4O60224 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 MRPS33P4-201ENST00000434892 317 ntBASIC5.47□□□□□ -1.53
SSX4O60224 EMC3-AS1-205ENST00000438698 534 ntBASIC5.47□□□□□ -1.53
SSX4O60224 KRT8P51-201ENST00000438938 274 ntBASIC5.47□□□□□ -1.53
SSX4O60224 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX4O60224 RPL31P20-201ENST00000449593 360 ntBASIC5.47□□□□□ -1.53
SSX4O60224 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.47□□□□□ -1.53
SSX4O60224 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SSX4O60224 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.47□□□□□ -1.53
SSX4O60224 SNORA70.11-201ENST00000515987 138 ntBASIC5.47□□□□□ -1.53
SSX4O60224 SNORA70.13-201ENST00000516116 138 ntBASIC5.47□□□□□ -1.53
SSX4O60224 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX4O60224 OR10D4P-201ENST00000525892 951 ntBASIC5.47□□□□□ -1.53
SSX4O60224 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.47□□□□□ -1.53
SSX4O60224 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX4O60224 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.47□□□□□ -1.53
SSX4O60224 AL121839.1-201ENST00000556233 1185 ntBASIC5.47□□□□□ -1.53
SSX4O60224 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.47□□□□□ -1.53
SSX4O60224 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX4O60224 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.47□□□□□ -1.53
SSX4O60224 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX4O60224 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.47□□□□□ -1.53
SSX4O60224 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX4O60224 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX4O60224 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX4O60224 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX4O60224 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX4O60224 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX4O60224 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
SSX4O60224 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX4O60224 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX4O60224 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX4O60224 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.47□□□□□ -1.53
SSX4O60224 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSX4O60224 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX4O60224 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
SSX4O60224 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSX4O60224 RPL31P11-201ENST00000426558 1558 ntBASIC5.46□□□□□ -1.53
SSX4O60224 UGT2B24P-201ENST00000514441 1597 ntBASIC5.46□□□□□ -1.53
SSX4O60224 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
SSX4O60224 AC096921.2-201ENST00000561507 1916 ntBASIC5.46□□□□□ -1.53
SSX4O60224 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SSX4O60224 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
SSX4O60224 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SSX4O60224 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SSX4O60224 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.46□□□□□ -1.53
SSX4O60224 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
SSX4O60224 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
SSX4O60224 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.46□□□□□ -1.54
SSX4O60224 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SSX4O60224 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.46□□□□□ -1.54
SSX4O60224 AC004386.1-201ENST00000393214 761 ntBASIC5.46□□□□□ -1.54
SSX4O60224 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.46□□□□□ -1.54
SSX4O60224 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX4O60224 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SSX4O60224 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX4O60224 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX4O60224 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX4O60224 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.46□□□□□ -1.54
SSX4O60224 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX4O60224 AC099670.2-201ENST00000435130 321 ntBASIC5.46□□□□□ -1.54
SSX4O60224 MTND2P40-201ENST00000436718 841 ntBASIC5.46□□□□□ -1.54
SSX4O60224 DNAJA1P5-201ENST00000440278 943 ntBASIC5.46□□□□□ -1.54
SSX4O60224 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.46□□□□□ -1.54
SSX4O60224 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.46□□□□□ -1.54
SSX4O60224 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX4O60224 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.46□□□□□ -1.54
SSX4O60224 RPL37AP8-201ENST00000494116 276 ntBASIC5.46□□□□□ -1.54
SSX4O60224 AC022206.1-201ENST00000495947 347 ntBASIC5.46□□□□□ -1.54
SSX4O60224 AK4P6-201ENST00000505168 528 ntBASIC5.46□□□□□ -1.54
SSX4O60224 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX4O60224 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.46□□□□□ -1.54
SSX4O60224 RNU6-319P-201ENST00000516025 108 ntBASIC5.46□□□□□ -1.54
SSX4O60224 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX4O60224 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.46□□□□□ -1.54
SSX4O60224 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX4O60224 AP004609.2-201ENST00000532177 190 ntBASIC5.46□□□□□ -1.54
SSX4O60224 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.46□□□□□ -1.54
SSX4O60224 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX4O60224 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms