Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
KDELR3O43731 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KDELR3O43731 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
KDELR3O43731 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.8□□□□□ -1.48
KDELR3O43731 RNA5SP46-201ENST00000362370 120 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 RNA5SP131-201ENST00000365452 119 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 RNA5SP30-201ENST00000365552 115 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
KDELR3O43731 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
KDELR3O43731 RMRPP5-201ENST00000411156 267 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.8□□□□□ -1.48
KDELR3O43731 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.8□□□□□ -1.48
KDELR3O43731 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.8□□□□□ -1.48
KDELR3O43731 Z84478.1-201ENST00000438230 1219 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 AC002504.1-201ENST00000438281 691 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 RPS27AP2-201ENST00000457576 465 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 RN7SL273P-201ENST00000481561 299 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 RPL7P51-201ENST00000490532 749 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 TMEM97P2-201ENST00000517841 403 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.8□□□□□ -1.48
KDELR3O43731 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.8□□□□□ -1.48
KDELR3O43731 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.8□□□□□ -1.48
KDELR3O43731 HSPE1P2-201ENST00000554777 306 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.8□□□□□ -1.48
KDELR3O43731 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.8□□□□□ -1.48
KDELR3O43731 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.8□□□□□ -1.48
KDELR3O43731 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.8□□□□□ -1.48
KDELR3O43731 AC060780.2-201ENST00000589047 198 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.8□□□□□ -1.48
KDELR3O43731 AC126175.1-201ENST00000617041 758 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 AC009120.7-201ENST00000623452 780 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KDELR3O43731 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KDELR3O43731 AC007159.1-201ENST00000566529 4706 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KDELR3O43731 AL158152.1-201ENST00000602652 1435 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KDELR3O43731 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KDELR3O43731 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.8□□□□□ -1.48
KDELR3O43731 KARSP1-201ENST00000451871 1752 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 SRRM1P3-201ENST00000426911 2678 ntBASIC5.8□□□□□ -1.48
KDELR3O43731 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
KDELR3O43731 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KDELR3O43731 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KDELR3O43731 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.79□□□□□ -1.48
KDELR3O43731 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.79□□□□□ -1.48
KDELR3O43731 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.79□□□□□ -1.48
KDELR3O43731 RNU1-136P-201ENST00000384181 164 ntBASIC5.79□□□□□ -1.48
KDELR3O43731 SNORA17A-201ENST00000391185 133 ntBASIC5.79□□□□□ -1.48
KDELR3O43731 OR2AT2P-201ENST00000413438 905 ntBASIC5.79□□□□□ -1.48
KDELR3O43731 METTL15P3-201ENST00000415522 1221 ntBASIC5.79□□□□□ -1.48
KDELR3O43731 BMS1P17-202ENST00000416720 316 ntBASIC5.79□□□□□ -1.48
KDELR3O43731 AC113412.1-201ENST00000425840 504 ntBASIC5.79□□□□□ -1.48
KDELR3O43731 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.79□□□□□ -1.48
KDELR3O43731 AC093719.1-201ENST00000480427 441 ntBASIC5.79□□□□□ -1.48
KDELR3O43731 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.79□□□□□ -1.48
KDELR3O43731 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.79□□□□□ -1.48
KDELR3O43731 AC109481.1-201ENST00000509173 282 ntBASIC5.79□□□□□ -1.48
KDELR3O43731 LDHBP3-201ENST00000514909 822 ntBASIC5.79□□□□□ -1.48
KDELR3O43731 AC139697.1-201ENST00000548429 745 ntBASIC5.79□□□□□ -1.48
KDELR3O43731 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.79□□□□□ -1.48
KDELR3O43731 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.79□□□□□ -1.48
KDELR3O43731 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.79□□□□□ -1.48
KDELR3O43731 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.79□□□□□ -1.48
KDELR3O43731 RN7SL787P-201ENST00000613000 284 ntBASIC5.79□□□□□ -1.48
KDELR3O43731 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.79□□□□□ -1.48
KDELR3O43731 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 AC241377.1-201ENST00000619797 406 ntBASIC5.79□□□□□ -1.48
KDELR3O43731 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.79□□□□□ -1.48
KDELR3O43731 AL512356.3-201ENST00000623005 461 ntBASIC5.79□□□□□ -1.48
KDELR3O43731 SNORA17.5-201ENST00000630429 132 ntBASIC5.79□□□□□ -1.48
KDELR3O43731 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.79□□□□□ -1.48
KDELR3O43731 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
KDELR3O43731 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
KDELR3O43731 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
KDELR3O43731 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
KDELR3O43731 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 AC034229.2-201ENST00000566945 2508 ntBASIC5.79□□□□□ -1.48
KDELR3O43731 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KDELR3O43731 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.79□□□□□ -1.48
KDELR3O43731 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
KDELR3O43731 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
KDELR3O43731 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
KDELR3O43731 KYNUP3-201ENST00000574386 1341 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms