Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 OXR1-212ENST00000521592 993 ntTSL 5 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 ZNF519P2-201ENST00000557032 169 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC009955.2-201ENST00000597288 542 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AP000255.1-201ENST00000610276 676 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AC140479.4-205ENST00000636339 820 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 METTL8-218ENST00000638989 876 ntTSL 5 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 METTL8-219ENST00000640734 726 ntTSL 2 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 AL590065.1-201ENST00000603371 4774 ntBASIC9.17□□□□□ -0.94
PDZRN3Q9UPQ7 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 SNORA26.8-201ENST00000391306 124 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AL033519.1-201ENST00000407266 307 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AL354751.2-201ENST00000415471 210 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 FDPSP1-201ENST00000424976 1071 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC017019.1-201ENST00000426129 261 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AL121776.1-201ENST00000429337 372 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AL731892.1-201ENST00000437364 1192 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 RPEP4-201ENST00000437636 602 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AL606490.8-201ENST00000441624 319 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 BX005266.3-201ENST00000443013 1075 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC068491.1-201ENST00000449539 1241 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 BX323845.2-201ENST00000458382 234 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 RN7SL168P-201ENST00000463821 279 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC021074.2-201ENST00000468434 172 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 RN7SL306P-201ENST00000492941 296 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC055733.3-201ENST00000505214 523 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 LECT2-203ENST00000512872 762 ntTSL 5 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 MAST4-IT1-201ENST00000514241 658 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC092709.1-201ENST00000521355 1045 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 MT1B-202ENST00000562399 351 ntTSL 3 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 DUXAP4-201ENST00000603046 613 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 AC091805.2-201ENST00000603848 235 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 TP53TG1_2.1-201ENST00000611226 182 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 OR2A3P-202ENST00000641249 1776 ntBASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
PDZRN3Q9UPQ7 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 CTAGE11P-201ENST00000451540 2353 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 AP002907.1-201ENST00000606361 1430 ntBASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
PDZRN3Q9UPQ7 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms