Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 PMS2P3-207ENST00000529061 717 ntBASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 MIR4505-201ENST00000582238 73 ntBASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 OR7E18P-201ENST00000592589 702 ntBASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 AC012616.1-201ENST00000600294 197 ntBASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 AL390318.1-201ENST00000624564 687 ntBASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 AC079776.5-201ENST00000641920 211 ntBASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPC1L1Q9UHC9 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 MIR143-201ENST00000385300 106 ntBASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 AC096921.1-201ENST00000411661 375 ntBASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 AL513325.1-201ENST00000417716 1034 ntBASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 TMEM183AP1-205ENST00000432739 290 ntBASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 AC019185.1-201ENST00000442718 389 ntBASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 MYO5BP2-201ENST00000449815 1277 ntBASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 AL035090.1-201ENST00000454835 332 ntBASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 AC128716.1-201ENST00000475129 166 ntBASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 AL136038.1-201ENST00000497246 351 ntBASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 AC021106.1-201ENST00000509020 1058 ntBASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 ATP5LP3-201ENST00000514223 304 ntBASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 AC025857.2-201ENST00000602711 238 ntBASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 AC005229.3-201ENST00000603438 323 ntBASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 OR4F13P-202ENST00000560066 2054 ntBASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.61□□□□□ -1.19
NPC1L1Q9UHC9 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 UGT2B24P-201ENST00000514441 1597 ntBASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 GABARAPL3-201ENST00000412799 354 ntBASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 AP000547.1-201ENST00000454360 617 ntBASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 AC112191.2-201ENST00000522428 333 ntBASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 AL049872.1-201ENST00000556323 322 ntBASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 CDC42EP3P1-201ENST00000601004 764 ntBASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 AL118522.2-201ENST00000616045 615 ntBASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 MIR6719-201ENST00000622428 87 ntBASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
NPC1L1Q9UHC9 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 AL391361.1-201ENST00000405580 489 ntBASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 OR2AT2P-201ENST00000413438 905 ntBASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 OR6E1P-201ENST00000414424 923 ntBASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 AC092106.1-201ENST00000444291 373 ntBASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 AZGP1P2-201ENST00000454506 345 ntBASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms