Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
GABPAQ06546 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.7□□□□□ -1.34
GABPAQ06546 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.7□□□□□ -1.34
GABPAQ06546 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
GABPAQ06546 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
GABPAQ06546 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.69□□□□□ -1.34
GABPAQ06546 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.69□□□□□ -1.34
GABPAQ06546 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.69□□□□□ -1.34
GABPAQ06546 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.69□□□□□ -1.34
GABPAQ06546 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.69□□□□□ -1.34
GABPAQ06546 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
GABPAQ06546 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
GABPAQ06546 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
GABPAQ06546 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
GABPAQ06546 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
GABPAQ06546 RPL23AP17-201ENST00000401064 499 ntBASIC6.69□□□□□ -1.34
GABPAQ06546 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.69□□□□□ -1.34
GABPAQ06546 CFL1P1-202ENST00000432948 411 ntBASIC6.69□□□□□ -1.34
GABPAQ06546 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.69□□□□□ -1.34
GABPAQ06546 VDAC2P4-201ENST00000452925 711 ntBASIC6.69□□□□□ -1.34
GABPAQ06546 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.69□□□□□ -1.34
GABPAQ06546 AL133445.1-201ENST00000467051 452 ntBASIC6.69□□□□□ -1.34
GABPAQ06546 UBA52P7-201ENST00000486088 380 ntBASIC6.69□□□□□ -1.34
GABPAQ06546 EIF1P7-201ENST00000487533 337 ntBASIC6.69□□□□□ -1.34
GABPAQ06546 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.69□□□□□ -1.34
GABPAQ06546 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
GABPAQ06546 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.69□□□□□ -1.34
GABPAQ06546 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.69□□□□□ -1.34
GABPAQ06546 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.69□□□□□ -1.34
GABPAQ06546 MRPS21P7-201ENST00000566937 238 ntBASIC6.69□□□□□ -1.34
GABPAQ06546 RBM22P12-201ENST00000567098 1255 ntBASIC6.69□□□□□ -1.34
GABPAQ06546 AL163952.1-202ENST00000569625 600 ntBASIC6.69□□□□□ -1.34
GABPAQ06546 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.69□□□□□ -1.34
GABPAQ06546 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.69□□□□□ -1.34
GABPAQ06546 OR7E18P-201ENST00000592589 702 ntBASIC6.69□□□□□ -1.34
GABPAQ06546 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.69□□□□□ -1.34
GABPAQ06546 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.69□□□□□ -1.34
GABPAQ06546 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.69□□□□□ -1.34
GABPAQ06546 AC010245.2-201ENST00000606908 1167 ntBASIC6.69□□□□□ -1.34
GABPAQ06546 AL035661.1-201ENST00000620459 1144 ntBASIC6.69□□□□□ -1.34
GABPAQ06546 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
GABPAQ06546 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
GABPAQ06546 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
GABPAQ06546 AC235565.1-201ENST00000456962 1325 ntBASIC6.69□□□□□ -1.34
GABPAQ06546 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
GABPAQ06546 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
GABPAQ06546 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
GABPAQ06546 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
GABPAQ06546 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
GABPAQ06546 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
GABPAQ06546 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
GABPAQ06546 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
GABPAQ06546 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.68□□□□□ -1.34
GABPAQ06546 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
GABPAQ06546 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.68□□□□□ -1.34
GABPAQ06546 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
GABPAQ06546 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.68□□□□□ -1.34
GABPAQ06546 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
GABPAQ06546 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
GABPAQ06546 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
GABPAQ06546 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.68□□□□□ -1.34
GABPAQ06546 RNA5SP91-201ENST00000390902 119 ntBASIC6.68□□□□□ -1.34
GABPAQ06546 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.68□□□□□ -1.34
GABPAQ06546 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.68□□□□□ -1.34
GABPAQ06546 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.68□□□□□ -1.34
GABPAQ06546 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.68□□□□□ -1.34
GABPAQ06546 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.68□□□□□ -1.34
GABPAQ06546 LDHAP2-201ENST00000437325 985 ntBASIC6.68□□□□□ -1.34
GABPAQ06546 RPS23P2-201ENST00000463671 415 ntBASIC6.68□□□□□ -1.34
GABPAQ06546 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.68□□□□□ -1.34
GABPAQ06546 RN7SL547P-201ENST00000490793 290 ntBASIC6.68□□□□□ -1.34
GABPAQ06546 snoU109.5-201ENST00000516231 132 ntBASIC6.68□□□□□ -1.34
GABPAQ06546 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.68□□□□□ -1.34
GABPAQ06546 AC125612.1-201ENST00000547580 377 ntBASIC6.68□□□□□ -1.34
GABPAQ06546 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.68□□□□□ -1.34
GABPAQ06546 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.68□□□□□ -1.34
GABPAQ06546 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.68□□□□□ -1.34
GABPAQ06546 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.68□□□□□ -1.34
GABPAQ06546 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.68□□□□□ -1.34
GABPAQ06546 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.68□□□□□ -1.34
GABPAQ06546 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.68□□□□□ -1.34
GABPAQ06546 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.68□□□□□ -1.34
GABPAQ06546 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.68□□□□□ -1.34
GABPAQ06546 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
GABPAQ06546 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
GABPAQ06546 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.68□□□□□ -1.34
GABPAQ06546 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
GABPAQ06546 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.68□□□□□ -1.34
GABPAQ06546 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
GABPAQ06546 CASC19-248ENST00000641674 1356 ntBASIC6.68□□□□□ -1.34
GABPAQ06546 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
GABPAQ06546 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
GABPAQ06546 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
GABPAQ06546 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
GABPAQ06546 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
GABPAQ06546 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
GABPAQ06546 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
GABPAQ06546 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
GABPAQ06546 AC087516.1-201ENST00000561236 2428 ntBASIC6.67□□□□□ -1.34
GABPAQ06546 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms