Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CKS1BP61024 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CKS1BP61024 MIR301B-201ENST00000390813 78 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 ATP5F1P2-201ENST00000398143 760 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 GPS2P1-201ENST00000411761 986 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 RPL18AP14-201ENST00000417685 526 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.11□□□□□ -1.75
CKS1BP61024 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.11□□□□□ -1.75
CKS1BP61024 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC013403.1-201ENST00000436954 263 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 EMC3-AS1-205ENST00000438698 534 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 NPM1P23-201ENST00000440193 849 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC4.11□□□□□ -1.75
CKS1BP61024 AL020997.1-201ENST00000446554 349 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC073587.1-201ENST00000447093 876 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.11□□□□□ -1.75
CKS1BP61024 RPL23AP60-201ENST00000450011 454 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC4.11□□□□□ -1.75
CKS1BP61024 RBMY2EP-202ENST00000456360 940 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 RNU7-157P-201ENST00000459600 66 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.11□□□□□ -1.75
CKS1BP61024 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
CKS1BP61024 RN7SL643P-201ENST00000471845 291 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 RN7SL326P-201ENST00000477493 296 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 AC079080.1-201ENST00000479841 822 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 RN7SL413P-201ENST00000482700 297 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 UBA52P3-201ENST00000491303 382 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 RFPL4AP3-201ENST00000515267 345 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.11□□□□□ -1.75
CKS1BP61024 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.11□□□□□ -1.75
CKS1BP61024 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC083964.1-201ENST00000607549 630 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 AL589743.6-201ENST00000611025 117 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 MIR6731-201ENST00000614863 72 ntBASIC4.11□□□□□ -1.75
CKS1BP61024 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CKS1BP61024 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
CKS1BP61024 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CKS1BP61024 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.11□□□□□ -1.75
CKS1BP61024 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CKS1BP61024 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CKS1BP61024 AC079298.1-201ENST00000625026 1619 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.1□□□□□ -1.75
CKS1BP61024 AL592182.3-201ENST00000642132 3304 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CKS1BP61024 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CKS1BP61024 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CKS1BP61024 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.1□□□□□ -1.75
CKS1BP61024 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CKS1BP61024 AP000542.2-201ENST00000623199 6179 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CKS1BP61024 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.1□□□□□ -1.75
CKS1BP61024 RN7SKP145-201ENST00000363291 303 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 SNORA43.1-201ENST00000364863 140 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 RNU1-84P-201ENST00000365447 164 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CKS1BP61024 UBBP2-201ENST00000376781 231 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CKS1BP61024 AL117344.1-201ENST00000407196 616 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 RNA5SP155-201ENST00000411154 129 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 MTND2P12-201ENST00000417560 1252 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 HYALP1-201ENST00000417674 1279 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 AC092570.3-201ENST00000420113 693 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 CDC42P6-201ENST00000421246 576 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 PTPN2P1-201ENST00000423212 1072 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC4.1□□□□□ -1.75
CKS1BP61024 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC4.1□□□□□ -1.75
CKS1BP61024 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.1□□□□□ -1.75
CKS1BP61024 RPS3AP38-201ENST00000435889 763 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.1□□□□□ -1.75
CKS1BP61024 SNRPFP2-201ENST00000440710 251 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC4.1□□□□□ -1.75
CKS1BP61024 AL845321.1-201ENST00000444603 348 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 AL356133.1-201ENST00000444762 372 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.1□□□□□ -1.75
CKS1BP61024 UCK2-205ENST00000469256 753 ntTSL 3 BASIC4.1□□□□□ -1.75
CKS1BP61024 RN7SL369P-201ENST00000477138 299 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 TRBV5-2-201ENST00000489095 273 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 GLUD1P3-202ENST00000508551 200 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 AC008868.1-201ENST00000509786 737 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms