Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 OR9K1P-201ENST00000326513 941 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 RPL11P4-201ENST00000332269 436 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXA3P55318 SNORA21-201ENST00000362423 132 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 RNU6-249P-201ENST00000363016 102 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXA3P55318 MIR188-201ENST00000385034 86 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 MIR301B-201ENST00000390813 78 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 FTH1P26-201ENST00000406512 701 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXA3P55318 RN7SKP39-201ENST00000410773 322 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 AC002524.1-201ENST00000411687 547 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXA3P55318 RIMKLBP2-201ENST00000424737 654 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 TMEM183AP1-205ENST00000432739 290 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 PSMD10P2-201ENST00000432890 672 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXA3P55318 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXA3P55318 AC234771.2-201ENST00000445718 597 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 OR7E116P-201ENST00000448529 957 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXA3P55318 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXA3P55318 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXA3P55318 NXT1P1-201ENST00000458481 316 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 RPS4XP12-201ENST00000461747 709 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 RN7SL83P-201ENST00000468131 297 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXA3P55318 RPS7P11-201ENST00000484240 586 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXA3P55318 RN7SKP253-201ENST00000516424 309 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXA3P55318 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXA3P55318 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXA3P55318 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXA3P55318 AC084851.2-201ENST00000530377 364 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 AC036111.2-201ENST00000533247 901 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 SLC25A51P2-201ENST00000535708 889 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXA3P55318 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXA3P55318 AL359715.3-201ENST00000569267 2123 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 MIR378H-201ENST00000579966 83 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 AC127024.5-201ENST00000580085 462 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXA3P55318 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXA3P55318 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 RFPL4AP6-201ENST00000616792 846 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXA3P55318 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXA3P55318 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXA3P55318 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXA3P55318 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXA3P55318 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXA3P55318 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXA3P55318 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXA3P55318 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXA3P55318 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXA3P55318 AL450345.1-202ENST00000605741 3881 ntBASIC4.23□□□□□ -1.73
FOXA3P55318 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXA3P55318 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXA3P55318 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXA3P55318 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXA3P55318 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
FOXA3P55318 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXA3P55318 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXA3P55318 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
FOXA3P55318 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXA3P55318 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXA3P55318 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
FOXA3P55318 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
FOXA3P55318 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXA3P55318 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
FOXA3P55318 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
FOXA3P55318 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
FOXA3P55318 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
FOXA3P55318 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.22□□□□□ -1.73
FOXA3P55318 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
FOXA3P55318 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
FOXA3P55318 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
FOXA3P55318 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXA3P55318 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
FOXA3P55318 RNA5SP485-201ENST00000365053 119 ntBASIC4.22□□□□□ -1.73
FOXA3P55318 RNA5SP77-201ENST00000365394 120 ntBASIC4.22□□□□□ -1.73
FOXA3P55318 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXA3P55318 AL033519.1-201ENST00000407266 307 ntBASIC4.22□□□□□ -1.73
FOXA3P55318 AL161742.1-201ENST00000418154 584 ntBASIC4.22□□□□□ -1.73
FOXA3P55318 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXA3P55318 AC113412.1-201ENST00000425840 504 ntBASIC4.22□□□□□ -1.73
FOXA3P55318 RPL7AP49-201ENST00000429522 581 ntBASIC4.22□□□□□ -1.73
FOXA3P55318 AL591438.1-201ENST00000433508 581 ntBASIC4.22□□□□□ -1.73
FOXA3P55318 RPS10P14-201ENST00000440748 502 ntBASIC4.22□□□□□ -1.73
FOXA3P55318 AL590004.3-202ENST00000445883 451 ntBASIC4.22□□□□□ -1.73
FOXA3P55318 RPS18P1-201ENST00000447840 458 ntBASIC4.22□□□□□ -1.73
FOXA3P55318 AC021660.1-201ENST00000465006 554 ntBASIC4.22□□□□□ -1.73
FOXA3P55318 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
FOXA3P55318 AC091544.1-201ENST00000484702 348 ntBASIC4.22□□□□□ -1.73
FOXA3P55318 OR11I1P-201ENST00000486033 954 ntBASIC4.22□□□□□ -1.73
FOXA3P55318 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXA3P55318 AC074255.1-201ENST00000511259 501 ntBASIC4.22□□□□□ -1.73
FOXA3P55318 AC091912.1-201ENST00000511351 248 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms