Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC074255.1-201ENST00000511259 501 ntBASIC5.95□□□□□ -1.46
CDH6P55285 RNU6-964P-201ENST00000516524 69 ntBASIC5.95□□□□□ -1.46
CDH6P55285 AC136777.2-201ENST00000522979 358 ntBASIC5.95□□□□□ -1.46
CDH6P55285 AC005363.1-201ENST00000530779 351 ntBASIC5.95□□□□□ -1.46
CDH6P55285 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH6P55285 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.95□□□□□ -1.46
CDH6P55285 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.95□□□□□ -1.46
CDH6P55285 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CDH6P55285 COX6CP7-201ENST00000597056 208 ntBASIC5.95□□□□□ -1.46
CDH6P55285 AL138895.2-201ENST00000603019 178 ntBASIC5.95□□□□□ -1.46
CDH6P55285 AC067773.1-201ENST00000603284 1094 ntBASIC5.95□□□□□ -1.46
CDH6P55285 AL353729.2-201ENST00000605859 1249 ntBASIC5.95□□□□□ -1.46
CDH6P55285 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH6P55285 FO681491.1-202ENST00000623392 737 ntBASIC5.95□□□□□ -1.46
CDH6P55285 AC022919.1-201ENST00000624979 626 ntBASIC5.95□□□□□ -1.46
CDH6P55285 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH6P55285 AC079776.5-201ENST00000641920 211 ntBASIC5.95□□□□□ -1.46
CDH6P55285 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH6P55285 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.95□□□□□ -1.46
CDH6P55285 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.95□□□□□ -1.46
CDH6P55285 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH6P55285 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH6P55285 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH6P55285 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CDH6P55285 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH6P55285 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH6P55285 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CDH6P55285 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH6P55285 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CDH6P55285 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH6P55285 Z95114.1-201ENST00000624264 14574 ntBASIC5.94□□□□□ -1.46
CDH6P55285 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
CDH6P55285 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CDH6P55285 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH6P55285 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH6P55285 MIR621-201ENST00000384919 96 ntBASIC5.94□□□□□ -1.46
CDH6P55285 AK4P4-201ENST00000419465 646 ntBASIC5.94□□□□□ -1.46
CDH6P55285 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH6P55285 AL035660.1-201ENST00000422041 222 ntBASIC5.94□□□□□ -1.46
CDH6P55285 AC115283.1-201ENST00000427353 400 ntBASIC5.94□□□□□ -1.46
CDH6P55285 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.94□□□□□ -1.46
CDH6P55285 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH6P55285 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.94□□□□□ -1.46
CDH6P55285 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH6P55285 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH6P55285 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH6P55285 OR7E157P-201ENST00000494376 911 ntBASIC5.94□□□□□ -1.46
CDH6P55285 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH6P55285 SCARNA6.1-201ENST00000516989 238 ntBASIC5.94□□□□□ -1.46
CDH6P55285 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH6P55285 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CDH6P55285 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH6P55285 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH6P55285 AC084824.2-201ENST00000548906 345 ntBASIC5.94□□□□□ -1.46
CDH6P55285 AC025857.2-201ENST00000602711 238 ntBASIC5.94□□□□□ -1.46
CDH6P55285 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH6P55285 LSM1P2-201ENST00000604911 322 ntBASIC5.94□□□□□ -1.46
CDH6P55285 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH6P55285 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH6P55285 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH6P55285 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.94□□□□□ -1.46
CDH6P55285 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CDH6P55285 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH6P55285 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
CDH6P55285 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH6P55285 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH6P55285 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH6P55285 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH6P55285 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH6P55285 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH6P55285 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH6P55285 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CDH6P55285 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH6P55285 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CDH6P55285 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH6P55285 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CDH6P55285 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH6P55285 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH6P55285 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH6P55285 AC009120.1-201ENST00000493458 473 ntBASIC5.93□□□□□ -1.46
CDH6P55285 GAPDHP62-201ENST00000515313 990 ntBASIC5.93□□□□□ -1.46
CDH6P55285 AC021678.3-201ENST00000517893 476 ntBASIC5.93□□□□□ -1.46
CDH6P55285 IGKV2-19-201ENST00000518132 283 ntBASIC5.93□□□□□ -1.46
CDH6P55285 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH6P55285 AC139697.1-201ENST00000548429 745 ntBASIC5.93□□□□□ -1.46
CDH6P55285 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.93□□□□□ -1.46
CDH6P55285 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH6P55285 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH6P55285 AC016839.1-201ENST00000578162 867 ntBASIC5.93□□□□□ -1.46
CDH6P55285 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH6P55285 AC108865.2-201ENST00000606881 432 ntBASIC5.93□□□□□ -1.46
CDH6P55285 AL031658.2-201ENST00000616850 651 ntBASIC5.93□□□□□ -1.46
CDH6P55285 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH6P55285 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH6P55285 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH6P55285 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH6P55285 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH6P55285 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH6P55285 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH6P55285 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms