Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC023245.1-201ENST00000468501 517 ntBASIC5.87□□□□□ -1.47
LIMK2P53671 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMK2P53671 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMK2P53671 SETP21-201ENST00000514799 892 ntBASIC5.87□□□□□ -1.47
LIMK2P53671 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.87□□□□□ -1.47
LIMK2P53671 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMK2P53671 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.87□□□□□ -1.47
LIMK2P53671 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMK2P53671 TXNP4-201ENST00000575018 310 ntBASIC5.87□□□□□ -1.47
LIMK2P53671 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMK2P53671 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.87□□□□□ -1.47
LIMK2P53671 AL049840.6-201ENST00000604583 345 ntBASIC5.87□□□□□ -1.47
LIMK2P53671 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMK2P53671 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.87□□□□□ -1.47
LIMK2P53671 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.87□□□□□ -1.47
LIMK2P53671 AC079776.5-201ENST00000641920 211 ntBASIC5.87□□□□□ -1.47
LIMK2P53671 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK2P53671 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK2P53671 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.87□□□□□ -1.47
LIMK2P53671 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK2P53671 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK2P53671 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK2P53671 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LIMK2P53671 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.86□□□□□ -1.47
LIMK2P53671 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LIMK2P53671 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK2P53671 AC012254.3-201ENST00000591183 2117 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK2P53671 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
LIMK2P53671 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK2P53671 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMK2P53671 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK2P53671 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK2P53671 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK2P53671 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK2P53671 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LIMK2P53671 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK2P53671 AC005522.1-201ENST00000395416 346 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 EEF1B2P8-201ENST00000414101 671 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 RPL35AP3-201ENST00000414680 288 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 BX284632.2-201ENST00000421091 399 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.86□□□□□ -1.47
LIMK2P53671 KATNBL1P2-201ENST00000433311 835 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 GAPDHP75-201ENST00000433910 943 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 TUBB4BP6-201ENST00000437576 479 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 AL512605.1-202ENST00000441919 381 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 AL359955.2-201ENST00000445380 353 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.86□□□□□ -1.47
LIMK2P53671 AC073072.2-201ENST00000447425 348 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 AL445466.1-201ENST00000448432 357 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 RN7SL174P-201ENST00000475578 289 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.86□□□□□ -1.47
LIMK2P53671 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.86□□□□□ -1.47
LIMK2P53671 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.86□□□□□ -1.47
LIMK2P53671 WBP1LP3-201ENST00000523033 208 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.86□□□□□ -1.47
LIMK2P53671 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.86□□□□□ -1.47
LIMK2P53671 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMK2P53671 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.86□□□□□ -1.47
LIMK2P53671 AC018690.1-201ENST00000608144 626 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 AP000894.4-201ENST00000610185 483 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMK2P53671 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMK2P53671 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK2P53671 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.86□□□□□ -1.47
LIMK2P53671 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
LIMK2P53671 AC009962.1-201ENST00000567327 3813 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.86□□□□□ -1.47
LIMK2P53671 AP000432.2-201ENST00000624164 2048 ntBASIC5.86□□□□□ -1.47
LIMK2P53671 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK2P53671 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK2P53671 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
LIMK2P53671 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK2P53671 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK2P53671 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
LIMK2P53671 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK2P53671 AC239868.2-201ENST00000564237 4527 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK2P53671 MFSD8-239ENST00000641590 2479 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 RBPJP7-201ENST00000442803 1447 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 RBPJP5-201ENST00000449433 1447 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK2P53671 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK2P53671 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK2P53671 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIMK2P53671 TMSB4XP4-201ENST00000323496 618 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMK2P53671 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
LIMK2P53671 SNORA81-201ENST00000408493 178 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 RNA5SP178-201ENST00000410380 128 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 KIF4CP-201ENST00000422742 1279 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.85□□□□□ -1.47
LIMK2P53671 VN1R96P-201ENST00000446052 858 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMK2P53671 AP006222.1-205ENST00000450734 457 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.85□□□□□ -1.47
LIMK2P53671 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.85□□□□□ -1.47
LIMK2P53671 OR8Q1P-201ENST00000526467 655 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 AP000648.1-201ENST00000529682 397 ntBASIC5.85□□□□□ -1.47
LIMK2P53671 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms