Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AF287957.1-201ENST00000607368 1595 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.16□□□□□ -1.42
PTPN9P43378 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PTPN9P43378 RNU6-386P-201ENST00000362650 107 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 RPL12P16-201ENST00000431098 498 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PTPN9P43378 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.16□□□□□ -1.42
PTPN9P43378 AC096775.1-201ENST00000437724 448 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 MTND4P15-201ENST00000437913 1033 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 SDR42E1P3-201ENST00000438345 502 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 MTCO3P43-201ENST00000440974 771 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 RPS15AP29-201ENST00000445539 400 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.16□□□□□ -1.42
PTPN9P43378 AP002884.1-201ENST00000479691 655 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 RPL37P23-201ENST00000492641 294 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.16□□□□□ -1.42
PTPN9P43378 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.16□□□□□ -1.42
PTPN9P43378 SETP21-201ENST00000514799 892 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.16□□□□□ -1.42
PTPN9P43378 AC090424.1-201ENST00000535243 736 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 AL121594.2-201ENST00000541658 472 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.16□□□□□ -1.42
PTPN9P43378 AP000619.2-201ENST00000546014 969 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PTPN9P43378 NPM1P42-201ENST00000560329 862 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.16□□□□□ -1.42
PTPN9P43378 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.16□□□□□ -1.42
PTPN9P43378 AL163952.1-202ENST00000569625 600 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 MIR4776-2-201ENST00000580204 80 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 MIR4271-201ENST00000582451 67 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.16□□□□□ -1.42
PTPN9P43378 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.16□□□□□ -1.42
PTPN9P43378 AC125494.2-201ENST00000602431 657 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 AC092474.3-201ENST00000603022 568 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 AL583832.1-201ENST00000603227 784 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 AL139099.4-201ENST00000614802 114 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 AC024884.1-201ENST00000620583 399 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.16□□□□□ -1.42
PTPN9P43378 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.16□□□□□ -1.42
PTPN9P43378 OR8A1-204ENST00000642111 1145 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 AC027088.4-201ENST00000611559 1947 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PTPN9P43378 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.16□□□□□ -1.42
PTPN9P43378 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
PTPN9P43378 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PTPN9P43378 CAP1P2-201ENST00000417455 1409 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
PTPN9P43378 AC092070.2-203ENST00000598377 3644 ntBASIC6.16□□□□□ -1.42
PTPN9P43378 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.15□□□□□ -1.42
PTPN9P43378 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
PTPN9P43378 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPN9P43378 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPN9P43378 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPN9P43378 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTPN9P43378 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.15□□□□□ -1.42
PTPN9P43378 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
PTPN9P43378 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PTPN9P43378 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTPN9P43378 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTPN9P43378 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPN9P43378 AL589655.1-201ENST00000405398 482 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 AL354890.1-201ENST00000413730 346 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 BX284632.2-201ENST00000421091 399 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 AL356806.1-201ENST00000422524 916 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 AC092651.1-201ENST00000426110 312 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 AC069154.1-201ENST00000432914 542 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPN9P43378 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.15□□□□□ -1.42
PTPN9P43378 AL512605.1-202ENST00000441919 381 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 AL359955.2-201ENST00000445380 353 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPN9P43378 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.15□□□□□ -1.42
PTPN9P43378 RN7SL741P-201ENST00000482473 289 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 RN7SL193P-201ENST00000491708 276 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 RPL37AP8-201ENST00000494116 276 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.15□□□□□ -1.42
PTPN9P43378 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPN9P43378 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPN9P43378 RNU6-1334P-201ENST00000516032 105 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 MIR2117-201ENST00000516780 80 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 NPM1P52-201ENST00000518264 846 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPN9P43378 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPN9P43378 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPN9P43378 AC079905.1-201ENST00000549280 475 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 AC091078.2-201ENST00000557145 559 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPN9P43378 MTND4LP25-201ENST00000570218 163 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 GARSP1-201ENST00000570895 719 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.15□□□□□ -1.42
PTPN9P43378 AC090079.2-201ENST00000575289 768 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms