Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SSR1P43307 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSR1P43307 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSR1P43307 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.27□□□□□ -1.41
SSR1P43307 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSR1P43307 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.26□□□□□ -1.41
SSR1P43307 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSR1P43307 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSR1P43307 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSR1P43307 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSR1P43307 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSR1P43307 YWHAZP6-201ENST00000399764 738 ntBASIC6.26□□□□□ -1.41
SSR1P43307 RN7SKP108-201ENST00000411367 328 ntBASIC6.26□□□□□ -1.41
SSR1P43307 OR13Z1P-201ENST00000416141 834 ntBASIC6.26□□□□□ -1.41
SSR1P43307 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.26□□□□□ -1.41
SSR1P43307 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.26□□□□□ -1.41
SSR1P43307 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.26□□□□□ -1.41
SSR1P43307 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSR1P43307 AC099782.1-201ENST00000425889 474 ntBASIC6.26□□□□□ -1.41
SSR1P43307 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.26□□□□□ -1.41
SSR1P43307 AC007383.1-201ENST00000445875 636 ntBASIC6.26□□□□□ -1.41
SSR1P43307 RN7SL254P-201ENST00000460609 284 ntBASIC6.26□□□□□ -1.41
SSR1P43307 PFN1P6-201ENST00000476786 399 ntBASIC6.26□□□□□ -1.41
SSR1P43307 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.26□□□□□ -1.41
SSR1P43307 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSR1P43307 TOMM22P4-201ENST00000511318 336 ntBASIC6.26□□□□□ -1.41
SSR1P43307 AC136777.2-201ENST00000522979 358 ntBASIC6.26□□□□□ -1.41
SSR1P43307 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.26□□□□□ -1.41
SSR1P43307 AC084759.1-201ENST00000561168 290 ntBASIC6.26□□□□□ -1.41
SSR1P43307 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSR1P43307 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.26□□□□□ -1.41
SSR1P43307 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.26□□□□□ -1.41
SSR1P43307 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.26□□□□□ -1.41
SSR1P43307 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.26□□□□□ -1.41
SSR1P43307 AC025857.2-201ENST00000602711 238 ntBASIC6.26□□□□□ -1.41
SSR1P43307 SMIM12P1-201ENST00000603004 274 ntBASIC6.26□□□□□ -1.41
SSR1P43307 AL080312.2-201ENST00000613001 630 ntBASIC6.26□□□□□ -1.41
SSR1P43307 HTR1DP1-201ENST00000616500 888 ntBASIC6.26□□□□□ -1.41
SSR1P43307 MIR6721-201ENST00000617181 87 ntBASIC6.26□□□□□ -1.41
SSR1P43307 AF117829.2-201ENST00000619538 361 ntBASIC6.26□□□□□ -1.41
SSR1P43307 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSR1P43307 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSR1P43307 NR1H5P-201ENST00000452683 1377 ntBASIC6.26□□□□□ -1.41
SSR1P43307 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSR1P43307 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSR1P43307 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.26□□□□□ -1.41
SSR1P43307 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.26□□□□□ -1.41
SSR1P43307 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SSR1P43307 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSR1P43307 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSR1P43307 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.26□□□□□ -1.41
SSR1P43307 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.26□□□□□ -1.41
SSR1P43307 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SSR1P43307 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.25□□□□□ -1.41
SSR1P43307 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.25□□□□□ -1.41
SSR1P43307 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.25□□□□□ -1.41
SSR1P43307 RN7SKP250-201ENST00000363924 321 ntBASIC6.25□□□□□ -1.41
SSR1P43307 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 AL035422.1-201ENST00000414193 397 ntBASIC6.25□□□□□ -1.41
SSR1P43307 RPL12P16-201ENST00000431098 498 ntBASIC6.25□□□□□ -1.41
SSR1P43307 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.25□□□□□ -1.41
SSR1P43307 GAPDHP59-201ENST00000435908 267 ntBASIC6.25□□□□□ -1.41
SSR1P43307 AC023141.3-201ENST00000436698 278 ntBASIC6.25□□□□□ -1.41
SSR1P43307 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.25□□□□□ -1.41
SSR1P43307 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.25□□□□□ -1.41
SSR1P43307 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.25□□□□□ -1.41
SSR1P43307 HMGB1P7-201ENST00000450921 612 ntBASIC6.25□□□□□ -1.41
SSR1P43307 PPIAP7-201ENST00000454070 489 ntBASIC6.25□□□□□ -1.41
SSR1P43307 OSTCP1-201ENST00000455507 450 ntBASIC6.25□□□□□ -1.41
SSR1P43307 AL603882.1-201ENST00000463059 681 ntBASIC6.25□□□□□ -1.41
SSR1P43307 AC079080.1-201ENST00000479841 822 ntBASIC6.25□□□□□ -1.41
SSR1P43307 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 AC008629.2-201ENST00000503783 483 ntBASIC6.25□□□□□ -1.41
SSR1P43307 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.25□□□□□ -1.41
SSR1P43307 LDHBP3-201ENST00000514909 822 ntBASIC6.25□□□□□ -1.41
SSR1P43307 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.25□□□□□ -1.41
SSR1P43307 AP000620.1-201ENST00000527147 504 ntBASIC6.25□□□□□ -1.41
SSR1P43307 OR4A41P-201ENST00000533053 928 ntBASIC6.25□□□□□ -1.41
SSR1P43307 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.25□□□□□ -1.41
SSR1P43307 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 AC007346.2-201ENST00000564816 892 ntBASIC6.25□□□□□ -1.41
SSR1P43307 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.25□□□□□ -1.41
SSR1P43307 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.25□□□□□ -1.41
SSR1P43307 AC011500.1-201ENST00000601963 469 ntBASIC6.25□□□□□ -1.41
SSR1P43307 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.25□□□□□ -1.41
SSR1P43307 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SSR1P43307 FAM27E2-201ENST00000619668 403 ntBASIC6.25□□□□□ -1.41
SSR1P43307 AL357140.4-201ENST00000636827 412 ntBASIC6.25□□□□□ -1.41
SSR1P43307 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.25□□□□□ -1.41
SSR1P43307 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SSR1P43307 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms