Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RPS26P38-201ENST00000414476 348 ntBASIC6.59□□□□□ -1.35
CIITAP33076 AC127526.2-201ENST00000426436 775 ntBASIC6.59□□□□□ -1.35
CIITAP33076 USP24P1-201ENST00000433802 779 ntBASIC6.59□□□□□ -1.35
CIITAP33076 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.59□□□□□ -1.35
CIITAP33076 RPS3AP38-201ENST00000435889 763 ntBASIC6.59□□□□□ -1.35
CIITAP33076 NPM1P48-201ENST00000436002 853 ntBASIC6.59□□□□□ -1.35
CIITAP33076 LDHAP2-201ENST00000437325 985 ntBASIC6.59□□□□□ -1.35
CIITAP33076 AC002075.1-201ENST00000457396 676 ntBASIC6.59□□□□□ -1.35
CIITAP33076 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.59□□□□□ -1.35
CIITAP33076 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.59□□□□□ -1.35
CIITAP33076 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.59□□□□□ -1.35
CIITAP33076 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.59□□□□□ -1.35
CIITAP33076 snoU109.5-201ENST00000516231 132 ntBASIC6.59□□□□□ -1.35
CIITAP33076 SUMO2P19-201ENST00000518920 295 ntBASIC6.59□□□□□ -1.35
CIITAP33076 AC078899.1-201ENST00000521432 1185 ntBASIC6.59□□□□□ -1.35
CIITAP33076 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.59□□□□□ -1.35
CIITAP33076 OR5D2P-201ENST00000524390 911 ntBASIC6.59□□□□□ -1.35
CIITAP33076 AC078878.1-201ENST00000539832 958 ntBASIC6.59□□□□□ -1.35
CIITAP33076 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.59□□□□□ -1.35
CIITAP33076 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
CIITAP33076 DPPA2P4-201ENST00000563717 878 ntBASIC6.59□□□□□ -1.35
CIITAP33076 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.59□□□□□ -1.35
CIITAP33076 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.59□□□□□ -1.35
CIITAP33076 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.59□□□□□ -1.35
CIITAP33076 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
CIITAP33076 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.59□□□□□ -1.35
CIITAP33076 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CIITAP33076 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CIITAP33076 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CIITAP33076 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.59□□□□□ -1.35
CIITAP33076 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CIITAP33076 ICE2P1-201ENST00000512800 1849 ntBASIC6.59□□□□□ -1.35
CIITAP33076 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CIITAP33076 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CIITAP33076 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CIITAP33076 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.36
CIITAP33076 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CIITAP33076 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CIITAP33076 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.58□□□□□ -1.36
CIITAP33076 CDY11P-201ENST00000447168 1651 ntBASIC6.58□□□□□ -1.36
CIITAP33076 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CIITAP33076 DNM1P47-203ENST00000571780 12667 ntBASIC6.58□□□□□ -1.36
CIITAP33076 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CIITAP33076 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.58□□□□□ -1.36
CIITAP33076 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.58□□□□□ -1.36
CIITAP33076 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
CIITAP33076 FBXL21-201ENST00000297158 1305 ntBASIC6.58□□□□□ -1.36
CIITAP33076 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.58□□□□□ -1.36
CIITAP33076 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
CIITAP33076 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.58□□□□□ -1.36
CIITAP33076 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
CIITAP33076 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CIITAP33076 SNORA11.3-201ENST00000408471 128 ntBASIC6.58□□□□□ -1.36
CIITAP33076 AL357752.1-201ENST00000412817 349 ntBASIC6.58□□□□□ -1.36
CIITAP33076 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.58□□□□□ -1.36
CIITAP33076 AC019205.1-201ENST00000421830 730 ntBASIC6.58□□□□□ -1.36
CIITAP33076 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.58□□□□□ -1.36
CIITAP33076 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.58□□□□□ -1.36
CIITAP33076 UBE2V2P1-201ENST00000434717 398 ntBASIC6.58□□□□□ -1.36
CIITAP33076 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.58□□□□□ -1.36
CIITAP33076 FCF1P7-201ENST00000451185 558 ntBASIC6.58□□□□□ -1.36
CIITAP33076 AC089999.1-201ENST00000460336 374 ntBASIC6.58□□□□□ -1.36
CIITAP33076 AC006539.1-201ENST00000481419 501 ntBASIC6.58□□□□□ -1.36
CIITAP33076 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.58□□□□□ -1.36
CIITAP33076 AC139365.2-201ENST00000517972 253 ntBASIC6.58□□□□□ -1.36
CIITAP33076 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.58□□□□□ -1.36
CIITAP33076 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.58□□□□□ -1.36
CIITAP33076 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.58□□□□□ -1.36
CIITAP33076 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.58□□□□□ -1.36
CIITAP33076 AC126615.2-201ENST00000553003 515 ntBASIC6.58□□□□□ -1.36
CIITAP33076 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.58□□□□□ -1.36
CIITAP33076 AC096996.1-201ENST00000563813 325 ntBASIC6.58□□□□□ -1.36
CIITAP33076 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC6.58□□□□□ -1.36
CIITAP33076 AL163952.1-202ENST00000569625 600 ntBASIC6.58□□□□□ -1.36
CIITAP33076 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.58□□□□□ -1.36
CIITAP33076 MIR4260-201ENST00000583107 67 ntBASIC6.58□□□□□ -1.36
CIITAP33076 RN7SL544P-201ENST00000617232 284 ntBASIC6.58□□□□□ -1.36
CIITAP33076 SNORA11.6-201ENST00000619030 128 ntBASIC6.58□□□□□ -1.36
CIITAP33076 RN7SL763P-201ENST00000620922 284 ntBASIC6.58□□□□□ -1.36
CIITAP33076 AL391262.2-201ENST00000622466 494 ntBASIC6.58□□□□□ -1.36
CIITAP33076 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CIITAP33076 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CIITAP33076 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CIITAP33076 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.58□□□□□ -1.36
CIITAP33076 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
CIITAP33076 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CIITAP33076 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CIITAP33076 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CIITAP33076 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.57□□□□□ -1.36
CIITAP33076 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.57□□□□□ -1.36
CIITAP33076 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
CIITAP33076 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CIITAP33076 RNF19BPY-201ENST00000458209 1550 ntBASIC6.57□□□□□ -1.36
CIITAP33076 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CIITAP33076 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
CIITAP33076 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CIITAP33076 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.57□□□□□ -1.36
CIITAP33076 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CIITAP33076 AC117409.1-201ENST00000470499 1310 ntBASIC6.57□□□□□ -1.36
CIITAP33076 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms