Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CASQ1P31415 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.14□□□□□ -1.43
CASQ1P31415 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CASQ1P31415 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CASQ1P31415 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.14□□□□□ -1.43
CASQ1P31415 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CASQ1P31415 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.14□□□□□ -1.43
CASQ1P31415 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CASQ1P31415 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CASQ1P31415 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CASQ1P31415 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.14□□□□□ -1.43
CASQ1P31415 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CASQ1P31415 RPL11P4-201ENST00000332269 436 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 AL121886.1-201ENST00000358609 435 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.14□□□□□ -1.43
CASQ1P31415 AC092634.1-201ENST00000366505 199 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CASQ1P31415 OOSP1-201ENST00000398992 1270 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 AL356968.2-201ENST00000412769 1257 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.14□□□□□ -1.43
CASQ1P31415 AL360013.1-201ENST00000419031 858 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 ELOBP4-201ENST00000423418 296 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 NPM1P22-201ENST00000427761 952 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 NPM1P23-201ENST00000440193 849 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 AL645936.1-201ENST00000441979 518 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 RN7SL655P-201ENST00000486087 298 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 EIF4E2P2-201ENST00000492033 736 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.14□□□□□ -1.43
CASQ1P31415 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.14□□□□□ -1.43
CASQ1P31415 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.14□□□□□ -1.43
CASQ1P31415 OR8A2P-201ENST00000528631 952 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.14□□□□□ -1.43
CASQ1P31415 CHEK2P2-201ENST00000554701 672 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.14□□□□□ -1.43
CASQ1P31415 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.14□□□□□ -1.43
CASQ1P31415 OR7E19P-202ENST00000589942 844 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 AL031429.2-201ENST00000602605 649 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 AL353807.4-201ENST00000604995 257 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.14□□□□□ -1.43
CASQ1P31415 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.14□□□□□ -1.43
CASQ1P31415 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.14□□□□□ -1.43
CASQ1P31415 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
CASQ1P31415 AC117409.1-201ENST00000470499 1310 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CASQ1P31415 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CASQ1P31415 AC006206.1-201ENST00000544842 3387 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 AC073136.1-201ENST00000449426 2884 ntBASIC6.14□□□□□ -1.43
CASQ1P31415 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.14□□□□□ -1.43
CASQ1P31415 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CASQ1P31415 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.14□□□□□ -1.43
CASQ1P31415 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.14□□□□□ -1.43
CASQ1P31415 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CASQ1P31415 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CASQ1P31415 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CASQ1P31415 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
CASQ1P31415 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC6.13□□□□□ -1.43
CASQ1P31415 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CASQ1P31415 OR4F13P-202ENST00000560066 2054 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CASQ1P31415 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CASQ1P31415 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.13□□□□□ -1.43
CASQ1P31415 SNORD94-201ENST00000386037 137 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC6.13□□□□□ -1.43
CASQ1P31415 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.13□□□□□ -1.43
CASQ1P31415 AC006509.1-201ENST00000420788 634 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 AC239798.3-201ENST00000454459 408 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 RPL5P33-201ENST00000487833 905 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 RFPL4AP5-201ENST00000514977 504 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.13□□□□□ -1.43
CASQ1P31415 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.13□□□□□ -1.43
CASQ1P31415 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.13□□□□□ -1.43
CASQ1P31415 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
CASQ1P31415 AC037479.1-201ENST00000558361 625 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.13□□□□□ -1.43
CASQ1P31415 AF186192.2-204ENST00000581667 524 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 MIR4472-2-201ENST00000582069 67 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 MIR3187-201ENST00000583431 70 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 MIR7853-201ENST00000584820 132 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 MIR6731-201ENST00000614863 72 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 RFPL4AP6-201ENST00000616792 846 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.13□□□□□ -1.43
CASQ1P31415 AC117503.3-201ENST00000623811 601 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.13□□□□□ -1.43
CASQ1P31415 TMEM30CP-203ENST00000637814 1035 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
CASQ1P31415 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CASQ1P31415 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CASQ1P31415 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.13□□□□□ -1.43
CASQ1P31415 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CASQ1P31415 AC011755.1-201ENST00000623763 2049 ntBASIC6.13□□□□□ -1.43
CASQ1P31415 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
CASQ1P31415 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CASQ1P31415 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.12□□□□□ -1.43
CASQ1P31415 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.12□□□□□ -1.43
CASQ1P31415 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.12□□□□□ -1.43
CASQ1P31415 AC112198.2-201ENST00000426589 6996 ntBASIC6.12□□□□□ -1.43
CASQ1P31415 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CASQ1P31415 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CASQ1P31415 RNA5SP326-201ENST00000363209 110 ntBASIC6.12□□□□□ -1.43
CASQ1P31415 RNA5SP85-201ENST00000365378 119 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms