Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.55□□□□□ -1.52
CLPTM1O96005 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLPTM1O96005 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.55□□□□□ -1.52
CLPTM1O96005 AC011891.2-201ENST00000604949 397 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 AC016911.1-201ENST00000613297 452 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 AC012676.3-201ENST00000614983 479 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 AL355974.3-201ENST00000617383 467 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 AL391597.1-201ENST00000618707 694 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLPTM1O96005 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CLPTM1O96005 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.55□□□□□ -1.52
CLPTM1O96005 AC019072.1-201ENST00000604535 1551 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 AF287957.1-201ENST00000607368 1595 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLPTM1O96005 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CLPTM1O96005 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CLPTM1O96005 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CLPTM1O96005 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLPTM1O96005 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.54□□□□□ -1.52
CLPTM1O96005 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLPTM1O96005 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.54□□□□□ -1.52
CLPTM1O96005 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLPTM1O96005 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLPTM1O96005 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLPTM1O96005 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLPTM1O96005 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLPTM1O96005 RN7SKP281-201ENST00000410472 352 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 RN7SKP166-201ENST00000410812 305 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 AC002524.1-201ENST00000411687 547 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 AL360013.1-201ENST00000419031 858 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 MED28P4-201ENST00000433137 572 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.54□□□□□ -1.52
CLPTM1O96005 AC013410.1-201ENST00000436223 1232 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.54□□□□□ -1.52
CLPTM1O96005 GTF2IP14-201ENST00000441415 586 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 BTBD7P2-201ENST00000441962 620 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.54□□□□□ -1.52
CLPTM1O96005 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.54□□□□□ -1.52
CLPTM1O96005 AC023424.1-201ENST00000496058 459 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.54□□□□□ -1.52
CLPTM1O96005 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.54□□□□□ -1.52
CLPTM1O96005 AC147055.1-201ENST00000509261 750 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 RNA5SP418-201ENST00000515951 117 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 TMEM97P2-201ENST00000517841 403 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.54□□□□□ -1.52
CLPTM1O96005 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.54□□□□□ -1.52
CLPTM1O96005 SNRPGP1-201ENST00000553864 222 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.54□□□□□ -1.52
CLPTM1O96005 AC011500.1-201ENST00000601963 469 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 AL513327.3-201ENST00000602618 469 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 AC006213.4-201ENST00000616184 634 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.54□□□□□ -1.52
CLPTM1O96005 AL137067.2-201ENST00000621202 131 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 AL122023.1-201ENST00000622847 530 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CLPTM1O96005 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLPTM1O96005 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CLPTM1O96005 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLPTM1O96005 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLPTM1O96005 RPL31P11-201ENST00000426558 1558 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CLPTM1O96005 AC007938.2-201ENST00000604666 2634 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
CLPTM1O96005 ABCC13-202ENST00000463099 3842 ntBASIC5.54□□□□□ -1.52
CLPTM1O96005 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.54□□□□□ -1.52
CLPTM1O96005 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
CLPTM1O96005 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLPTM1O96005 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.54□□□□□ -1.52
CLPTM1O96005 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLPTM1O96005 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLPTM1O96005 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CLPTM1O96005 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLPTM1O96005 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLPTM1O96005 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.53□□□□□ -1.52
CLPTM1O96005 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CLPTM1O96005 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.53□□□□□ -1.52
CLPTM1O96005 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.53□□□□□ -1.52
CLPTM1O96005 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
CLPTM1O96005 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLPTM1O96005 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLPTM1O96005 HYALP1-201ENST00000417674 1279 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 FAM204CP-201ENST00000424489 642 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 CRIP1P1-201ENST00000427567 185 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 AC108479.1-201ENST00000431142 427 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 RPSAP32-201ENST00000432681 526 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLPTM1O96005 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.53□□□□□ -1.52
CLPTM1O96005 RN7SL72P-201ENST00000460697 269 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 AC005165.2-201ENST00000466070 380 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.53□□□□□ -1.52
CLPTM1O96005 COX6B1P2-201ENST00000489624 230 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 GM2AP2-201ENST00000491764 562 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 AL133372.1-201ENST00000493565 745 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 CCDC11P1-201ENST00000503137 1162 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.53□□□□□ -1.52
CLPTM1O96005 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.53□□□□□ -1.52
CLPTM1O96005 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms