Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC105185.1-201ENST00000518705 535 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC6.2□□□□□ -1.42
CNOT4O95628 CARSP2-201ENST00000520688 277 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 IGLVV-66-201ENST00000523818 341 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNOT4O95628 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNOT4O95628 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AP000916.1-201ENST00000533869 835 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.2□□□□□ -1.42
CNOT4O95628 AL135978.1-201ENST00000553618 1266 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.2□□□□□ -1.42
CNOT4O95628 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.2□□□□□ -1.42
CNOT4O95628 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.2□□□□□ -1.42
CNOT4O95628 EIF4A3P1-201ENST00000578499 647 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.2□□□□□ -1.42
CNOT4O95628 MIR4801-201ENST00000582704 82 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AC069366.1-201ENST00000583159 838 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 RPS27AP19-201ENST00000597285 458 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AC064872.1-201ENST00000604823 1072 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AC019257.2-201ENST00000605539 497 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.2□□□□□ -1.42
CNOT4O95628 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.2□□□□□ -1.42
CNOT4O95628 AL133243.1-201ENST00000614487 366 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AC074140.1-201ENST00000621617 208 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.2□□□□□ -1.42
CNOT4O95628 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.2□□□□□ -1.42
CNOT4O95628 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.2□□□□□ -1.42
CNOT4O95628 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
CNOT4O95628 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CNOT4O95628 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CNOT4O95628 YES1P1-201ENST00000418510 1628 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 Z93929.1-201ENST00000418200 1475 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNOT4O95628 DDX18P5-201ENST00000534547 1306 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.2□□□□□ -1.42
CNOT4O95628 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNOT4O95628 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNOT4O95628 AC007406.5-201ENST00000570140 3170 ntBASIC6.2□□□□□ -1.42
CNOT4O95628 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CNOT4O95628 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.19□□□□□ -1.42
CNOT4O95628 NCOA4P3-201ENST00000513203 1877 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.19□□□□□ -1.42
CNOT4O95628 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CNOT4O95628 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.19□□□□□ -1.42
CNOT4O95628 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
CNOT4O95628 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
CNOT4O95628 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CNOT4O95628 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CNOT4O95628 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CNOT4O95628 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CNOT4O95628 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CNOT4O95628 RNA5SP172-201ENST00000365061 118 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 RNU5A-2P-201ENST00000384337 116 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 MIR187-201ENST00000385062 109 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 RNU6-796P-201ENST00000391086 107 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.19□□□□□ -1.42
CNOT4O95628 TAF9BP2-201ENST00000400856 499 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.19□□□□□ -1.42
CNOT4O95628 Z68694.1-201ENST00000413929 841 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.19□□□□□ -1.42
CNOT4O95628 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.19□□□□□ -1.42
CNOT4O95628 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.19□□□□□ -1.42
CNOT4O95628 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.19□□□□□ -1.42
CNOT4O95628 AC006065.1-201ENST00000422539 802 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CNOT4O95628 GPN3P1-201ENST00000423883 535 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CNOT4O95628 AC007365.2-201ENST00000428806 458 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 LINC00328-2P-201ENST00000436585 219 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.19□□□□□ -1.42
CNOT4O95628 DNAJA1P5-201ENST00000440278 943 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 AL845321.1-201ENST00000444603 348 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.19□□□□□ -1.42
CNOT4O95628 AL589880.1-201ENST00000448271 287 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.19□□□□□ -1.42
CNOT4O95628 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.19□□□□□ -1.42
CNOT4O95628 AL034399.1-201ENST00000451535 380 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.19□□□□□ -1.42
CNOT4O95628 MED28P7-201ENST00000456611 530 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 RN7SL492P-201ENST00000460700 295 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 RPS26P11-201ENST00000463445 348 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 RPS26P6-201ENST00000475156 348 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 AC131233.1-201ENST00000479200 955 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.19□□□□□ -1.42
CNOT4O95628 RN7SL655P-201ENST00000486087 298 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.19□□□□□ -1.42
CNOT4O95628 XKRY-201ENST00000510392 1100 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.19□□□□□ -1.42
CNOT4O95628 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.19□□□□□ -1.42
CNOT4O95628 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.19□□□□□ -1.42
CNOT4O95628 GLYATL1P4-201ENST00000529326 906 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 EIF4A2P5-201ENST00000529914 499 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.19□□□□□ -1.42
CNOT4O95628 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CNOT4O95628 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CNOT4O95628 AC124891.1-201ENST00000536322 519 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.19□□□□□ -1.42
CNOT4O95628 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.19□□□□□ -1.42
CNOT4O95628 AC010287.1-201ENST00000566916 357 ntBASIC6.19□□□□□ -1.42
CNOT4O95628 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms